{"id":"W2525816043","doi":"10.1007/s12686-016-0612-1","title":"Plastid markers from whole plastome sequencing for gene-flow studies in the endangered endemic bellflowers of St Helena, Wahlenbergia angustifolia and Wahlenbergia linifolia (Campanulaceae)","year":2016,"lang":"en","type":"article","venue":"Conservation Genetics Resources","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"Langara College; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Indel; Gene flow; Endangered species; Critically endangered; Population; Evolutionary biology; Chloroplast DNA; Microsatellite; DNA sequencing; Endemism; Illumina dye sequencing; Ion semiconductor sequencing; Genetics; Genome; Ecology; Single-nucleotide polymorphism; Gene; Allele; Genetic variation; Habitat","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003196881,0.000234302,0.0002642638,0.0001016195,0.0001428685,0.00002717902,0.0002888842,0.0002218109,0.00001827195],"category_scores_gemma":[0.0002837414,0.0001723434,0.00008833675,0.0001337727,0.0002694898,0.000009921413,0.0001334462,0.00007601226,0.000002023161],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003423757,"about_ca_system_score_gemma":0.00007530815,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007020724,"about_ca_topic_score_gemma":0.000318864,"domain_scores_codex":[0.9984856,0.0001552434,0.000415649,0.0004367237,0.0002366657,0.0002701461],"domain_scores_gemma":[0.9988016,0.0003337237,0.000247969,0.0003464691,0.000201549,0.00006861391],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009435445,0.00003866097,0.1700597,0.0001597605,0.0004225466,0.000005278543,0.007584723,0.002631634,0.797052,0.00002467658,0.01238717,0.008690249],"study_design_scores_gemma":[0.008675513,0.001202034,0.5075942,0.0005459477,0.0004845303,0.00004008349,0.0173818,0.005093728,0.258665,0.001819504,0.1970135,0.001484214],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993508,0.003474389,0.0009555971,0.0005766513,0.0002265245,0.0003806159,0.00084068,0.000009664141,0.0000278824],"genre_scores_gemma":[0.9937614,0.001072889,0.004118794,0.0003298586,0.0001697273,0.00002807823,0.0001958832,0.00002154922,0.0003018804],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5383871,"threshold_uncertainty_score":0.702796,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03804383143637988,"score_gpt":0.2691960414627904,"score_spread":0.2311522100264105,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}