{"id":"W2525816050","doi":"10.1371/journal.pone.0163197","title":"NS3 Resistance-Associated Variants (RAVs) in Patients Infected with HCV Genotype 1a in Spain","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Hepatitis C virus research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"AIDS Vancouver","funders":"European Regional Development Fund; Instituto de Salud Carlos III","keywords":"Genotype; Hepatitis C virus; Clade; Virology; Sanger sequencing; NS3; Biology; Hepacivirus; Hepatitis C; Polymerase chain reaction; Nested polymerase chain reaction; Medicine; Virus; DNA sequencing; Gene; Genetics; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008322856,0.0003260843,0.0004895896,0.0009042856,0.0002618089,0.0006878413,0.0002809635,0.0004784074,0.001299217],"category_scores_gemma":[0.001345644,0.0002832888,0.0003738221,0.0007630876,0.0002824606,0.0002400954,0.0004872564,0.0003538852,0.0002508357],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005155025,"about_ca_system_score_gemma":0.0004285539,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01002624,"about_ca_topic_score_gemma":0.007525563,"domain_scores_codex":[0.999624,0.00008992176,0.00005386861,0.0001122898,0.00005403562,0.00006585615],"domain_scores_gemma":[0.9988598,0.0002300428,0.0005330455,0.00007395097,0.0001621454,0.0001410172],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002148956,0.00002388191,0.9972669,0.00002395182,0.00002357059,0.0001349764,0.000083323,0.00005988558,0.0002135055,0.000008002368,0.0001063602,0.001840698],"study_design_scores_gemma":[0.00003524268,0.0001435354,0.9979903,0.00003559971,0.00003068678,0.0006992014,0.0004125737,0.0001948317,0.00007660398,0.00002302298,0.0003531275,0.000005301142],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987335,0.0006031467,0.00005535912,0.00003124115,0.000005785003,0.000007272611,0.0002659682,0.000005077285,0.0002925982],"genre_scores_gemma":[0.9990381,0.0003028459,0.00008969968,0.00005217526,0.000008554548,0.000006246423,0.0003849504,0.000003284293,0.0001142679],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01002624,"threshold_uncertainty_score":0.01993579,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03684209483196951,"score_gpt":0.2517459019333954,"score_spread":0.2149038071014259,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}