{"id":"W2527812068","doi":"10.1128/genomea.01066-16","title":"Draft Genome Sequence of Ureolytic Environmental Isolate <i>Staphylococcus</i> sp. NA309","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Whole genome sequencing; Biology; Microbiology; Bacteria; Staphylococcus aureus; Litter; Staphylococcus; Genome; Sequence (biology); Ammonia; Gene; Genetics; Ecology; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001132145,0.0001860954,0.0001683231,0.00004332241,0.00007694332,0.000009697242,0.0003451654,0.00008102846,0.000120828],"category_scores_gemma":[0.000008471042,0.000146906,0.00008899301,0.00007883555,0.0001718432,0.000009741134,0.0001868093,0.00003953811,0.000161201],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002647195,"about_ca_system_score_gemma":0.00004903595,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008267784,"about_ca_topic_score_gemma":0.000001813926,"domain_scores_codex":[0.9987631,0.00002550357,0.000294795,0.0003973471,0.0001814364,0.0003378014],"domain_scores_gemma":[0.9991654,0.000005097278,0.0001439035,0.0005560771,0.00002653984,0.0001030082],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002258244,0.00008842516,0.002192519,0.000008441181,0.00005353897,0.000001103428,0.00003384747,0.000004797748,0.9963572,0.00004160611,0.0001618132,0.001034117],"study_design_scores_gemma":[0.001106338,0.0002396776,0.01898158,0.00001263002,0.0000443918,0.000007327052,0.00003836576,0.000003496938,0.1823445,0.0001777658,0.7966615,0.0003824437],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907452,0.002123662,0.002948357,0.0001516368,0.0001120403,0.0003385837,0.002547262,0.00001218532,0.001021],"genre_scores_gemma":[0.993964,0.001096711,0.0002740215,0.0003329742,0.0001801245,0.00005535626,0.0005755602,0.00002244199,0.003498833],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8140127,"threshold_uncertainty_score":0.5990652,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01091880678423956,"score_gpt":0.2307674149833581,"score_spread":0.2198486081991186,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}