{"id":"W2528706897","doi":"10.1038/ncomms13015","title":"Structure of the Neisseria meningitidis Type IV pilus","year":2016,"lang":"en","type":"article","venue":"Nature Communications","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":148,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"National Institute of Biomedical Imaging and Bioengineering; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Lawrence Berkeley National Laboratory; Centre National de la Recherche Scientifique; Institut National de la Santé et de la Recherche Médicale; National Cancer Institute; National Institutes of Health; Agence Nationale de la Recherche","keywords":"Neisseria meningitidis; Pilus; Microbiology; Neisseria; Bacterial protein; Biology; Computational biology; Genetics; Bacteria; Escherichia coli; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004192971,0.00006973327,0.00009884687,0.00003100515,0.0002355839,0.00000503097,0.0006506138,0.0002670843,0.0004568339],"category_scores_gemma":[0.0001560773,0.00003498455,0.00005121232,0.0001977164,0.0001443116,0.00005048231,0.0002449394,0.0003099307,0.00003410794],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001493288,"about_ca_system_score_gemma":0.00003236766,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003245862,"about_ca_topic_score_gemma":0.0003606938,"domain_scores_codex":[0.9995571,0.0001319622,0.0001340314,0.00007802608,0.000007001215,0.00009187638],"domain_scores_gemma":[0.9984036,0.0001480651,0.00009295383,0.001206437,0.0001423718,0.000006584288],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001303285,0.00002533122,0.005633637,0.000001351311,0.00004522654,4.09215e-9,0.00005084616,9.357522e-8,0.9679738,0.02078747,0.004543533,0.0009256986],"study_design_scores_gemma":[0.0006091003,0.00005423734,0.1521176,0.00005166827,0.00005661336,0.00003010812,0.00003982312,5.463837e-7,0.2661529,0.001407869,0.5793526,0.0001269854],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9877133,0.004269736,0.000006508494,0.00481062,0.001481539,0.0001271474,0.000103421,0.00003863154,0.001449094],"genre_scores_gemma":[0.99875,0.0001878248,0.0001111241,0.00005551786,0.00002048902,0.000003036284,0.00002368689,0.000007034178,0.0008412822],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7018209,"threshold_uncertainty_score":0.5002011,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01376142137884492,"score_gpt":0.2744820657656952,"score_spread":0.2607206443868503,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}