{"id":"W2528787559","doi":"10.1016/j.str.2016.08.007","title":"Structure of the Pseudomonas aeruginosa Type IVa Pilus Secretin at 7.4 Å","year":2016,"lang":"en","type":"article","venue":"Structure","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":false,"ca_institutions":"SickKids Foundation; Canada Research Chairs; Hospital for Sick Children; McMaster University; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Pilus; Periplasmic space; Pseudomonas aeruginosa; Secretin; Biophysics; Biology; Secretin family; Peptidoglycan; Bacterial outer membrane; Microbiology; Chemistry; Virulence; Cell biology; Bacteria; Biochemistry; Escherichia coli; Genetics; Pancreas; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00001669191,0.0001785307,0.0001400419,0.00001393468,0.00007696693,0.000007353118,0.0002990713,0.000275,0.0003606343],"category_scores_gemma":[0.00008603928,0.00008685388,0.00008668481,0.0001153094,0.000165465,0.000003811291,0.0002207318,0.00008797003,0.00000245891],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001955227,"about_ca_system_score_gemma":0.00003337981,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003750012,"about_ca_topic_score_gemma":0.00002286884,"domain_scores_codex":[0.9991249,0.00004349372,0.0001810252,0.0002917754,0.0001626315,0.0001961258],"domain_scores_gemma":[0.9992642,0.000008193682,0.000133872,0.000427153,0.0001082757,0.0000583432],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001027343,0.000002008258,0.007446214,0.00001625791,0.000022576,3.189389e-7,0.00002408746,0.000001234668,0.9902281,0.0001404196,0.0008783424,0.001137697],"study_design_scores_gemma":[0.0003084466,0.00005420326,0.04129762,0.00001647251,0.00001375641,0.00003261797,0.000004231392,9.602111e-7,0.9477846,0.001153964,0.009189263,0.0001438606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981826,0.0001660402,0.00002427016,0.0004974775,0.0004819182,0.000128536,0.0003766901,0.000009593735,0.0001328639],"genre_scores_gemma":[0.9983108,0.00002487992,0.0001518585,0.0002265454,0.000337344,6.727358e-7,0.0001348123,0.00001713674,0.0007959435],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04244351,"threshold_uncertainty_score":0.3948693,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003690780427821982,"score_gpt":0.1962262002079617,"score_spread":0.1925354197801397,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}