{"id":"W2529032957","doi":"10.1038/ng.3693","title":"Association of host genome with intestinal microbial composition in a large healthy cohort","year":2016,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":486,"is_retracted":false,"has_abstract":false,"ca_institutions":"Wilfrid Laurier University; Izaak Walton Killam Health Centre; University of Calgary; Sinai Health System; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Hospital for Sick Children; Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Genome-wide association study; Microbiome; Single-nucleotide polymorphism; Eubacterium; Genetics; Feces; Cohort; Gut flora; Microbial genetics; Genetic association; Gene; Immunology; Genotype; Ecology; Internal medicine; Bacteria; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000554058,0.0004691004,0.0004818221,0.0006863271,0.001086067,0.0008542935,0.0005652183,0.0008412439,0.002713506],"category_scores_gemma":[0.001412345,0.0005771033,0.0007396265,0.0008886839,0.0006020089,0.0004337218,0.0008245301,0.0009352138,0.000274963],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002118753,"about_ca_system_score_gemma":0.0003063684,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00690189,"about_ca_topic_score_gemma":0.006454236,"domain_scores_codex":[0.9992864,0.0001779223,0.00003863405,0.0003113606,0.00006004389,0.000125788],"domain_scores_gemma":[0.9991086,0.0001842998,0.0001817591,0.0001877238,0.00006681889,0.000270743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000693696,0.00007217615,0.9925131,0.00001083418,0.0003229276,0.0003531519,0.0002081562,0.00004470297,0.004521611,0.00006803348,0.000208942,0.0009827639],"study_design_scores_gemma":[0.00001950919,0.0001308529,0.998571,0.000003227849,0.0001098979,0.0004187298,0.0001901265,0.0001513629,0.0001444031,0.00005901527,0.0001956946,0.000006135865],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992034,0.0001317421,0.0001606936,0.00004366249,0.000008083822,0.000003279634,0.0002655387,0.000005849167,0.0001778799],"genre_scores_gemma":[0.9992366,0.00005408452,0.0001337651,0.00004208272,0.00001272013,0.000005964594,0.0001922317,0.000008026743,0.0003145204],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00690189,"threshold_uncertainty_score":0.01372343,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003183150370195161,"score_gpt":0.2405566349485624,"score_spread":0.2373734845783672,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}