{"id":"W2530132666","doi":"10.1038/srep35275","title":"Molecular evolution of a widely-adopted taxonomic marker (COI) across the animal tree of life","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Lepidoptera: Biology and Taxonomy","field":"Biochemistry, Genetics and Molecular Biology","cited_by":219,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Ontario Ministry of Research and Innovation; Jenny ja Antti Wihurin Rahasto; Oulun Yliopisto; Koneen Säätiö; Ella ja Georg Ehrnroothin Säätiö; Genome Canada; Suomen Kulttuurirahasto; Ontario Genomics; Ontario Genomics Institute","keywords":"Biology; Evolutionary biology; Lepidoptera genitalia; DNA barcoding; Taxonomic rank; Barcode; Phylogenetic tree; Molecular evolution; Phylogenetics; Amino acid; Taxon; Convergent evolution; Tree of life (biology); Zoology; Genetics; Ecology; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003747808,0.0002896945,0.0003654407,0.00235745,0.0006145915,0.0008582629,0.0002894753,0.0004846065,0.0009092517],"category_scores_gemma":[0.001109198,0.0001528492,0.0002571464,0.002723164,0.0004939855,0.0006232306,0.0005592392,0.0006616808,0.0003821076],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006536785,"about_ca_system_score_gemma":0.0003814615,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001505105,"about_ca_topic_score_gemma":0.003888182,"domain_scores_codex":[0.9995022,0.00005994596,0.00002834651,0.0002366422,0.0001242556,0.00004860969],"domain_scores_gemma":[0.9983479,0.000281353,0.0008282985,0.0001203851,0.0002336615,0.0001884674],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002656952,0.00005728285,0.1996888,0.0002853306,0.0001836088,0.0002009018,0.0008145839,0.0004572372,0.7368591,0.001183088,0.0002158293,0.05978853],"study_design_scores_gemma":[0.000006306212,0.0003739319,0.9457998,0.00009456517,0.0001349743,0.001017183,0.0005445219,0.001684038,0.04022431,0.0008896306,0.009191643,0.00003887837],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9840472,0.003371737,0.007772114,0.0001286471,0.00003418262,0.00002521719,0.001498789,0.00006631234,0.003055788],"genre_scores_gemma":[0.983332,0.001146983,0.01243849,0.0001047567,0.00001999237,0.00002777967,0.001881893,0.00003617748,0.001011823],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00235745,"threshold_uncertainty_score":0.004742861,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01093679735480451,"score_gpt":0.2304414553805264,"score_spread":0.2195046580257219,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}