{"id":"W2531158378","doi":"10.1111/syen.12211","title":"Two's company, three's a crowd: new insights on spruce budworm species boundaries using genotyping‐by‐sequencing in an integrative species assessment (Lepidoptera: Tortricidae)","year":2016,"lang":"en","type":"article","venue":"Systematic Entomology","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Royal Alberta Museum; Natural Resources Canada; Canadian Forest Service; University of Alberta","funders":"University of Alberta; Alberta Innovates Bio Solutions; Western Canada Research Grid; McGill University","keywords":"Biology; Spruce budworm; Choristoneura fumiferana; Subspecies; Reproductive isolation; Ecology; Tortricidae; Species complex; Gene flow; Population; Taxon; Phylogenetic tree; Lepidoptera genitalia; Evolutionary biology; Genetic variation; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003887981,0.000363569,0.0009427282,0.00007039841,0.0004129003,0.0002397287,0.0003736493,0.0001170706,0.0002377727],"category_scores_gemma":[0.0001265686,0.0001172373,0.0001073914,0.0003220082,0.0002811456,0.0002746016,0.0001265205,0.0001595032,0.00004188941],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006168557,"about_ca_system_score_gemma":0.00007580969,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002483925,"about_ca_topic_score_gemma":0.05263296,"domain_scores_codex":[0.9976038,0.0003602421,0.0006943622,0.0004867316,0.0003417289,0.0005131417],"domain_scores_gemma":[0.9986507,0.0007021179,0.0003450339,0.00008510536,0.00009123729,0.0001258084],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001359794,0.0001857639,0.07531978,0.0006716902,0.000176338,0.0001717828,0.003484463,0.0000116448,0.8638773,0.05449529,0.0004409784,0.001028974],"study_design_scores_gemma":[0.003587497,0.005551407,0.8661286,0.02776313,0.0003298303,0.0003980366,0.02866873,0.001087352,0.03163944,0.02705568,0.004359879,0.003430368],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936938,0.0007058276,0.0002858569,0.0004436563,0.0002754719,0.0006275689,0.00002554026,0.00006859321,0.003873673],"genre_scores_gemma":[0.9982868,0.00003580454,0.0002619605,0.0001316035,0.0003198647,0.00002954564,0.00001175035,0.000002786179,0.0009198372],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8322379,"threshold_uncertainty_score":0.964654,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07146749256880232,"score_gpt":0.2769987457142357,"score_spread":0.2055312531454334,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}