{"id":"W2531935932","doi":"10.1128/mbio.01253-16","title":"Genetic Dissection of the Type VI Secretion System in <i>Acinetobacter</i> and Identification of a Novel Peptidoglycan Hydrolase, TagX, Required for Its Biogenesis","year":2016,"lang":"en","type":"article","venue":"mBio","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Peptidoglycan; Biogenesis; Secretion; Identification (biology); Microbiology; Biology; Acinetobacter; Hydrolase; Computational biology; Gene; Genetics; Bacteria; Enzyme; Biochemistry; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001479699,0.0003956527,0.0001946841,0.0002054844,0.0001419501,0.000341146,0.0002310617,0.0002493868,0.0002705857],"category_scores_gemma":[0.0001952442,0.0001512051,0.000322994,0.0002591363,0.0001849908,0.0001610813,0.000249703,0.0005301994,0.0002344808],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004621721,"about_ca_system_score_gemma":0.0003140446,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001989073,"about_ca_topic_score_gemma":0.001630233,"domain_scores_codex":[0.9998363,0.00002702292,0.00003091749,0.00003223006,0.0000480669,0.00002543788],"domain_scores_gemma":[0.9998393,0.0000211105,0.00006912328,0.00001986841,0.00001691322,0.00003359213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003780376,0.00001163121,0.0003439222,0.00001520211,0.000002475544,0.00003178464,0.00001289028,0.00007990968,0.9987913,0.00004213222,0.000008519253,0.0006224652],"study_design_scores_gemma":[0.0000129984,0.0002101866,0.01887122,0.0000156084,0.00002795039,0.0007177158,0.0001452466,0.003163496,0.9745204,0.00009617807,0.002205724,0.0000132231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995532,0.0002127176,0.003319288,0.00006845206,0.000009897294,0.00002229873,0.0004420434,0.00004442572,0.0003488695],"genre_scores_gemma":[0.9853818,0.0003556701,0.01146321,0.00005107332,0.000006637946,0.00003066441,0.001586215,0.00005471378,0.00106997],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001989073,"threshold_uncertainty_score":0.003955007,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01544744901657396,"score_gpt":0.2551119485616089,"score_spread":0.2396644995450349,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}