{"id":"W2532327509","doi":"10.1093/molbev/msw234","title":"Spontaneous Mutation Accumulation in<i>Daphnia pulex</i>in Selection-Free vs. Competitive Environments","year":2016,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":99,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Mutation rate; Daphnia pulex; Genetics; Population; Mutation; Epistasis; Selection (genetic algorithm); Negative selection; Loss of heterozygosity; Evolutionary biology; Genome; Allele; Gene; Daphnia; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001797068,0.000143903,0.0001238908,0.0001197327,0.00005084287,0.000005749571,0.00009341617,0.0002651214,0.00001462172],"category_scores_gemma":[0.0001434221,0.0001295389,0.00003661467,0.0001081393,0.0001258053,0.000007822212,0.00007299607,0.00007221515,0.0000122327],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001017289,"about_ca_system_score_gemma":0.00003329527,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005110717,"about_ca_topic_score_gemma":0.0008058075,"domain_scores_codex":[0.9989001,0.0001737811,0.0002236716,0.0003922487,0.0000657602,0.0002444621],"domain_scores_gemma":[0.9996628,0.00001966087,0.00006821477,0.0001794829,0.00002263456,0.0000472534],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000224622,0.00007527351,0.09854591,0.000005218564,0.00001887742,0.00003077085,0.00002465366,0.0007973817,0.8891767,0.009567043,0.0000324855,0.001501017],"study_design_scores_gemma":[0.003534935,0.000694205,0.9577695,0.00004341407,0.00001928243,0.000369674,0.00005451258,0.003053001,0.01866233,0.01264404,0.002698734,0.0004563431],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9018065,0.0003713734,0.09683313,0.0003739198,0.00008831357,0.0002004973,0.00001839881,0.000009692397,0.0002981352],"genre_scores_gemma":[0.9984758,0.0001750125,0.0007641243,0.0001448154,0.00003421266,0.0000262825,0.0001532634,0.00001268112,0.0002137603],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8705144,"threshold_uncertainty_score":0.5282442,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004385711173983278,"score_gpt":0.2459925949266693,"score_spread":0.241606883752686,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}