{"id":"W2534638628","doi":"10.1128/jvi.01478-16","title":"The Potyvirus Silencing Suppressor Protein VPg Mediates Degradation of SGS3 via Ubiquitination and Autophagy Pathways","year":2016,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":170,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; Autophagy; Ubiquitin; Cell biology; Potyvirus; Gene silencing; Suppressor; Protein degradation; RNA interference; Signal transducing adaptor protein; Degradation (telecommunications); Signal transduction; Virology; Genetics; RNA; Virus; Apoptosis; Plant virus; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007412427,0.00006714394,0.0001601579,0.00002173286,0.0001527334,0.00001491252,0.000168979,0.00005825775,0.0000327509],"category_scores_gemma":[0.0007680234,0.00001678999,0.00004346852,0.00006913958,0.0001683944,0.0001575456,0.00006731821,0.00009228862,0.00000257196],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000183193,"about_ca_system_score_gemma":0.00001158265,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003135639,"about_ca_topic_score_gemma":0.0001393844,"domain_scores_codex":[0.9990276,0.0001919988,0.0002950719,0.00008148188,0.0002264314,0.0001774468],"domain_scores_gemma":[0.998346,0.001069534,0.0003404283,0.00002494314,0.0001710717,0.000047969],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001077989,0.00001840903,0.0002904444,0.000003087887,0.00001705384,0.000005074773,0.00003762509,3.470013e-7,0.927987,0.0001687048,0.0001167844,0.07124769],"study_design_scores_gemma":[0.0002870145,0.001257411,0.09605819,0.00003851233,0.00001113036,0.00005625375,0.000119076,0.00006133174,0.8967335,0.003819619,0.001494959,0.00006298064],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947987,0.0007693349,0.00002903197,0.004174945,0.00005571895,0.00009934341,0.00003486935,0.00000492212,0.0000331765],"genre_scores_gemma":[0.9989663,0.0007645123,0.00004630885,0.00003510819,0.0001255333,0.000005157819,0.000001249953,5.156678e-7,0.00005525558],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09576774,"threshold_uncertainty_score":0.1174717,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02376583070508453,"score_gpt":0.2372689805702184,"score_spread":0.2135031498651339,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}