{"id":"W2534699084","doi":"10.1371/journal.pcbi.1005412","title":"Ten simple rules for making research software more robust","year":2017,"lang":"en","type":"editorial","venue":"PLoS Computational Biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Ontario Institute for Cancer Research","keywords":"Simple (philosophy); Computer science; Software; Computational biology; Biology; Programming language","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001158398,0.000372858,0.0005014152,0.0002739337,0.0006758287,0.0001670952,0.001362227,0.00177491,0.00003639191],"category_scores_gemma":[0.01158281,0.0003296909,0.0002361855,0.00007014378,0.001067051,0.000006249249,0.0009095004,0.0007748719,0.00007932293],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007574655,"about_ca_system_score_gemma":0.001446391,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002096635,"about_ca_topic_score_gemma":0.00003532663,"domain_scores_codex":[0.9965784,0.0001607824,0.0005718484,0.0008185456,0.0009419374,0.000928464],"domain_scores_gemma":[0.9951829,0.001354086,0.0003059252,0.0006543719,0.002302206,0.0002004651],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001966221,0.0001096137,0.0001469287,0.0004058569,0.0002716966,0.000003199313,0.00003648944,0.0002473551,0.0006579862,0.00008497742,0.9896,0.008239297],"study_design_scores_gemma":[0.0008345884,0.0009108448,0.0001416499,0.00009710297,0.00003410961,0.000002908784,0.00004661861,0.00239288,0.0003454609,0.008336567,0.9864225,0.000434742],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"editorial","genre_gemma":"editorial","genre_scores_codex":[0.01083818,0.006167893,0.1934845,0.003784939,0.7394826,0.007098611,0.03519346,0.0002734725,0.003676346],"genre_scores_gemma":[0.004866972,0.0007790453,0.08739857,0.000271193,0.7964731,0.0005151221,0.1072869,0.0001717514,0.002237407],"genre_candidate":"editorial","genre_consensus":"editorial","teacher_disagreement_score":0.1060859,"threshold_uncertainty_score":0.9999155,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0756155332093567,"score_gpt":0.3957851927442008,"score_spread":0.3201696595348441,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}