{"id":"W2535006683","doi":"10.1007/978-1-4899-7708-3_8","title":"Analysis of DNA Hydroxymethylation Using Colorimetric Assay","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Epigenetics; DNA methylation; 5-Hydroxymethylcytosine; Cytosine; DNA; Methylation; 5-Methylcytosine; Brassica rapa; Molecular biology; Chemistry; Biology; Biochemistry; Gene; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001864047,0.003154279,0.001246021,0.003153993,0.001066044,0.0008393048,0.002485223,0.001260334,0.0058983],"category_scores_gemma":[0.001892379,0.001424457,0.001524836,0.0028347,0.001114007,0.0008591077,0.001042638,0.004981837,0.003089312],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006981216,"about_ca_system_score_gemma":0.001134624,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001702671,"about_ca_topic_score_gemma":0.003635194,"domain_scores_codex":[0.9968582,0.0008526039,0.0002238516,0.0008505005,0.0008616024,0.0003532298],"domain_scores_gemma":[0.9977308,0.0006607811,0.0002559079,0.0003538888,0.0007337308,0.0002648433],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002902131,0.0001565851,0.00127873,0.0002761679,0.0001212088,0.00007664219,0.0001957301,0.0002379259,0.9869768,0.000810271,0.0003238706,0.009255824],"study_design_scores_gemma":[0.00003186364,0.0002348021,0.001968418,0.00002038408,0.0001041604,0.00009156505,0.00004662986,0.002575633,0.9911078,0.0004170694,0.003366364,0.00003519474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.155949,0.004927368,0.8105965,0.0004431253,0.0008426236,0.001008094,0.003981842,0.003940475,0.01831097],"genre_scores_gemma":[0.3133911,0.004695651,0.6312215,0.0004969023,0.0002086306,0.004056398,0.01017714,0.0006689014,0.03508382],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.0058983,"threshold_uncertainty_score":0.01973176,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02790178658538661,"score_gpt":0.3938407235533068,"score_spread":0.3659389369679202,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}