{"id":"W2538080418","doi":"10.1097/mib.0000000000000939","title":"Increased Rates of Clostridium difficile Infection and Poor Outcomes in Patients with IBD with Cytomegalovirus","year":2016,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Internal medicine; Colectomy; Confidence interval; Gastroenterology; Clostridium difficile; Inflammatory bowel disease; Cytomegalovirus; Coinfection; Proportional hazards model; Case-control study; Hazard ratio; Ulcerative colitis; Immunology; Disease; Viral disease; Herpesviridae; Antibiotics; Virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001096017,0.0003319909,0.0005362747,0.0004162907,0.00007018542,0.00002722569,0.00009211038,0.0001049106,0.0001310999],"category_scores_gemma":[0.0002852582,0.0001873735,0.00008619149,0.0002965645,0.0003679974,0.0002383257,0.00007672315,0.0001524073,0.00002047549],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001692274,"about_ca_system_score_gemma":0.000352748,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002837238,"about_ca_topic_score_gemma":0.0001446107,"domain_scores_codex":[0.997932,0.00008484317,0.0004504987,0.0004363513,0.0006597925,0.00043651],"domain_scores_gemma":[0.9984989,0.0002631594,0.0001721432,0.0004059729,0.0002953664,0.0003644377],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.005676794,0.0009597909,0.9860509,0.0002638428,0.000147458,0.0001010261,0.00002957423,0.000003737976,0.005311449,0.00002882326,0.0001104622,0.00131615],"study_design_scores_gemma":[0.01027142,0.001080444,0.9474166,0.0004784498,0.0001407105,0.00000562731,0.00003158093,0.00001005266,0.04014703,0.00001045063,0.0001437329,0.0002639215],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982417,0.0001234639,0.000006174463,0.0002335638,0.00003297188,0.0008726569,0.0002275352,0.00007459412,0.0001873089],"genre_scores_gemma":[0.9995021,0.00008923328,0.00002128271,0.00004963572,0.00005109982,0.00008051957,0.00004205923,0.00004934084,0.0001147089],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03863431,"threshold_uncertainty_score":0.7640871,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009703436320867427,"score_gpt":0.2518311862573793,"score_spread":0.2421277499365119,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}