{"id":"W2540584554","doi":"10.1128/genomea.01177-16","title":"Draft Genome Sequences of Burkholderia contaminans FFI-28, a Strain Isolated from a Contaminated Pharmaceutical Solution","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"International Development Research Centre; University of Manitoba","keywords":"Strain (injury); Burkholderia; Genome; Biology; Contamination; Whole genome sequencing; Microbiology; Computational biology; Genetics; Bacteria; Gene; Ecology; Anatomy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003312967,0.0003173008,0.0005790921,0.0002138617,0.0001445448,0.00002637269,0.0001724379,0.0002117204,0.002388356],"category_scores_gemma":[0.00005334732,0.0002371786,0.0001657609,0.0003726005,0.000276134,0.0002287217,0.00008104914,0.0001677381,0.0001982844],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002994148,"about_ca_system_score_gemma":0.000215703,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004360718,"about_ca_topic_score_gemma":0.00002661701,"domain_scores_codex":[0.9976642,0.00009896499,0.0006968938,0.0005398808,0.0004161558,0.0005839405],"domain_scores_gemma":[0.9986233,0.00006454381,0.0002499223,0.0004282625,0.0003683169,0.0002656646],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003704171,0.0004250029,0.002890387,0.00005248031,0.0003792505,0.00004385299,0.0005289345,0.000001352475,0.990737,0.0000576387,0.0001170655,0.004396637],"study_design_scores_gemma":[0.04532989,0.00860581,0.300804,0.00193304,0.002830828,0.0002908023,0.002020465,0.0007634665,0.2599766,0.0005433418,0.3745321,0.002369656],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9821254,0.0009081339,0.01189771,0.0009970895,0.0004740322,0.0008941958,0.001751915,0.0001194866,0.0008320486],"genre_scores_gemma":[0.9964733,0.0005824508,0.0004579503,0.0003633458,0.0002117805,0.00008850951,0.0005315178,0.00003568599,0.001255513],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7307604,"threshold_uncertainty_score":0.9985236,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03424583361389712,"score_gpt":0.294397533075068,"score_spread":0.2601516994611709,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}