{"id":"W2542576093","doi":"10.1186/s13072-016-0086-0","title":"Hypoxia increases genome-wide bivalent epigenetic marking by specific gain of H3K27me3","year":2016,"lang":"en","type":"article","venue":"Epigenetics & Chromatin","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto; University Health Network; Princess Margaret Cancer Centre","funders":"Transnationale Universiteit Limburg; René Vogels Stichting; Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"H3K4me3; Biology; Epigenetics; Demethylase; Epigenomics; Histone; Histone methylation; Histone H3; Cell biology; Genetics; Gene expression; DNA methylation; Gene; Promoter","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005653356,0.0001439046,0.0001347541,0.0001173369,0.00008850811,0.0001549741,0.00009479162,0.0001271208,0.002403014],"category_scores_gemma":[0.00008941301,0.00007995676,0.0001521315,0.00008724463,0.0001406549,0.00009164707,0.0001908412,0.0001828338,0.0002250465],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001946653,"about_ca_system_score_gemma":0.0001010488,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007188164,"about_ca_topic_score_gemma":0.0008814693,"domain_scores_codex":[0.9999416,0.00000550702,0.000003422571,0.00001700402,0.00001449485,0.00001788921],"domain_scores_gemma":[0.9999074,0.00001700441,0.00002806469,0.00001126218,0.00001058635,0.00002576619],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008128679,0.000005712962,0.0006363553,0.00001472795,0.00000456725,0.00001976332,0.000005914244,0.00002249531,0.998226,0.00001612807,0.00003449243,0.0009326809],"study_design_scores_gemma":[0.00001248877,0.0003381401,0.1114819,0.000006647591,0.00002974514,0.0003885483,0.00005567776,0.000698548,0.8841979,0.00007170236,0.002713274,0.000005598287],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943132,0.001560671,0.002005758,0.00008359208,0.00002125576,0.00001054164,0.0005243195,0.0001010662,0.001379598],"genre_scores_gemma":[0.9968672,0.0004490064,0.0006597672,0.00004981776,0.000009048622,0.00001373994,0.0005379372,0.00001877916,0.001394697],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002403014,"threshold_uncertainty_score":0.008038878,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009925080786062059,"score_gpt":0.2267424517088279,"score_spread":0.2168173709227658,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}