{"id":"W2544921029","doi":"10.15698/mic2016.11.538","title":"The ubiquitin-conjugating enzyme, Ubc1, indirectly regulates SNF1 kinase activity via Forkhead-dependent transcription","year":2016,"lang":"en","type":"article","venue":"Microbial Cell","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"MAP kinase kinase kinase; ASK1; MAP2K7; Ubiquitin ligase; c-Raf; Cell biology; Protein kinase A; AMPK; Mitogen-activated protein kinase kinase; Ubiquitin-conjugating enzyme; Biochemistry; Transcription factor; TANK-binding kinase 1; Biology; Cyclin-dependent kinase 2; Cyclin-dependent kinase 9; Kinase; Ubiquitin; Chemistry; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003443839,0.0002094291,0.0001662011,0.00004110484,0.0002845307,0.0000557019,0.0002949757,0.0001906322,0.00008173525],"category_scores_gemma":[0.00003717384,0.0001333846,0.0001838992,0.00007791125,0.00008307886,0.00000928499,0.0001018919,0.0001011368,0.00006691625],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003695165,"about_ca_system_score_gemma":0.00005548099,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006340366,"about_ca_topic_score_gemma":0.0003901289,"domain_scores_codex":[0.9986286,0.0001737783,0.000239241,0.0004365731,0.0001404963,0.000381274],"domain_scores_gemma":[0.9992237,0.00004334054,0.0001596543,0.0004149527,0.00006526032,0.000093074],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001310283,0.00004511846,0.00008054057,0.000009192948,0.00003626543,0.000003648104,0.00003900949,0.000006461385,0.9756911,0.000001811713,0.01399869,0.00995712],"study_design_scores_gemma":[0.0005856066,0.00006940451,0.0001547902,0.00002179561,0.00003416217,0.00001193643,0.00002516032,0.00001718102,0.9471279,0.00001637284,0.05172902,0.0002066829],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944251,0.0003428768,0.003123612,0.0004454257,0.0002358455,0.0001808566,0.00007515537,0.00002838897,0.001142694],"genre_scores_gemma":[0.9901074,0.0002076647,0.0001601963,0.0001573541,0.0002474684,0.00001583439,0.00004870704,0.00002800025,0.009027403],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03773033,"threshold_uncertainty_score":0.5439265,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006263555322487796,"score_gpt":0.2092651548545393,"score_spread":0.2030015995320515,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}