{"id":"W2549871051","doi":"10.1038/ncomms13419","title":"Altered intestinal microbiota–host mitochondria crosstalk in new onset Crohn’s disease","year":2016,"lang":"en","type":"article","venue":"Nature Communications","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":453,"is_retracted":false,"has_abstract":true,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Guelph; University of Ottawa","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Center for Gastrointestinal Biology and Disease, School of Medicine, University of North Carolina at Chapel Hill; National Cancer Institute; Canadian Institutes of Health Research; Mansoura University; Ministero dello Sviluppo Economico; Crohn's and Colitis Canada; Saudi Arabian Cultural Bureau; Ontario Ministry of Economic Development and Innovation; Government of Canada; Ontario Genomics Institute; Canadian Child Health Clinician Scientist Program; University of Ottawa; National Institutes of Health; Ontario Genomics; Crohn's and Colitis Foundation of America; Genome Canada; King Abdulaziz University; Canadian Association of Gastroenterology","keywords":"Dysbiosis; Biology; Crosstalk; Gut flora; Colitis; Crohn's disease; Phenotype; Immunology; Inflammatory bowel disease; Disease; Microbiome; Pathogenesis; Microbiology; Genetics; Medicine; Gene; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001824367,0.000219118,0.0002898291,0.0003136051,0.0001655508,0.0003421833,0.00009021317,0.0002976578,0.0008452354],"category_scores_gemma":[0.0001979155,0.000146426,0.0001644509,0.0002446733,0.0002746161,0.000239241,0.0003299444,0.0003791996,0.00008492904],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002886004,"about_ca_system_score_gemma":0.0001155507,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003179238,"about_ca_topic_score_gemma":0.0004721527,"domain_scores_codex":[0.9999108,0.0000258943,0.000006002508,0.0000220024,0.00001913668,0.00001609131],"domain_scores_gemma":[0.9998492,0.00002364928,0.00006821031,0.000007556745,0.00001069865,0.00004067345],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001978091,0.0001097116,0.1320788,0.0002086624,0.00009425704,0.001695774,0.0002141379,0.0004267411,0.8531941,0.0002287463,0.0002228809,0.009548063],"study_design_scores_gemma":[0.00006789598,0.001104794,0.9068902,0.00004244172,0.000121325,0.006001547,0.0004171819,0.003044952,0.0790417,0.0008852278,0.002363685,0.00001898977],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981444,0.0009673925,0.0004998063,0.00007299543,0.000008498258,0.000004690947,0.00007473566,0.00001218403,0.0002153113],"genre_scores_gemma":[0.9989237,0.0003477215,0.0005432457,0.0000265043,0.000005427033,0.000003700625,0.00005459656,0.000001705208,0.00009335121],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008452354,"threshold_uncertainty_score":0.002827525,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01558071431618335,"score_gpt":0.3102168591428255,"score_spread":0.2946361448266422,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}