{"id":"W2552981499","doi":"10.1371/journal.pone.0165442","title":"Biogeography and Character Evolution of the Ciliate Genus Euplotes (Spirotrichea, Euplotia), with Description of Euplotes curdsi sp. nov.","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Tula Foundation","keywords":"Biology; Ciliate; Biogeography; Evolutionary biology; Genus; Zoology; Character (mathematics); Prokaryote; Genetics; Ecology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001090429,0.0001173237,0.0001622606,0.00005928264,0.00006147071,0.000006287086,0.0001571602,0.0001030778,0.000009540439],"category_scores_gemma":[0.00004551834,0.00007267755,0.00006344514,0.0001514583,0.000261528,0.00001169811,0.0001094845,0.00004707092,0.000003153531],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001037887,"about_ca_system_score_gemma":0.00003342268,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000839386,"about_ca_topic_score_gemma":0.00003218318,"domain_scores_codex":[0.9992409,0.00005105185,0.0001531119,0.0002202897,0.0001823572,0.0001522347],"domain_scores_gemma":[0.9993269,0.00001381543,0.0001598037,0.0002821956,0.0001736616,0.00004357364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000101603,0.0001641109,0.423842,0.000059475,0.0001482464,1.862428e-7,0.00002469668,1.929595e-7,0.5754414,0.00004005025,0.00001268593,0.0001653462],"study_design_scores_gemma":[0.0004125745,0.0002569527,0.4223164,0.0001296214,0.0001100755,0.000001407329,0.00001184949,0.000003098101,0.576537,0.00009076112,0.00004615223,0.00008415963],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979299,0.001059148,0.0003469599,0.0001615739,0.00002489677,0.0002764943,0.000134907,0.00000918419,0.0000569547],"genre_scores_gemma":[0.9989737,0.0003870725,0.0004069889,0.00003975749,0.00005651987,0.000009106664,0.00001103793,0.00001203053,0.0001038356],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001525598,"threshold_uncertainty_score":0.2963705,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01896301218121805,"score_gpt":0.1744222189670958,"score_spread":0.1554592067858778,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}