{"id":"W2553057372","doi":"10.1371/journal.pone.0164722","title":"Characterizing Transcriptional Networks in Male Rainbow Darter (Etheostoma caeruleum) that Regulate Testis Development over a Complete Reproductive Cycle","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Reproductive biology and impacts on aquatic species","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo; Environment and Climate Change Canada; University of New Brunswick","funders":"Canadian Water Network; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Transcriptome; Sertoli cell; Sperm; Spermatogenesis; Etheostoma; Andrology; Cell biology; Genetics; Gene; Endocrinology; Gene expression; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006674223,0.0001052506,0.000160313,0.000245982,0.0001455736,0.000159751,0.00007617487,0.0001039068,0.0005380692],"category_scores_gemma":[0.00009868778,0.00009448991,0.0001907641,0.0002462378,0.0001229775,0.0001094986,0.0001696725,0.0001481968,0.00009948573],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002375583,"about_ca_system_score_gemma":0.0001915195,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004187882,"about_ca_topic_score_gemma":0.01397379,"domain_scores_codex":[0.9999379,0.000002505024,0.000002767129,0.00003322473,0.00001136158,0.00001230811],"domain_scores_gemma":[0.9999025,0.000013955,0.00004315238,0.000006584751,0.00001857928,0.00001526044],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001092686,0.00001541529,0.03237891,0.00003973288,0.00001955056,0.00004538831,0.0001000692,0.0001577676,0.964431,0.00005042095,0.00008221756,0.00257019],"study_design_scores_gemma":[0.000006829888,0.0001197182,0.9795918,0.000003833288,0.00002438313,0.00008452777,0.0001423844,0.0007272681,0.01857312,0.0000359523,0.0006849888,0.000005143723],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984883,0.0001360722,0.0003186058,0.00001700958,0.000002009264,0.000006197776,0.0007279905,0.00001128338,0.0002925021],"genre_scores_gemma":[0.9936094,0.0002147154,0.001114392,0.0000816048,0.00000373158,0.00005787982,0.002777742,0.00001056973,0.002129804],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004187882,"threshold_uncertainty_score":0.008327007,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04398244954024507,"score_gpt":0.227183397415308,"score_spread":0.1832009478750629,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}