{"id":"W2553498078","doi":"10.3168/jds.2016-11770","title":"Genome-wide association study for lactation persistency, female fertility, longevity, and lifetime profit index traits in Holstein dairy cattle","year":2016,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Longevity; Fertility; Dairy cattle; Trait; Herd; Lactation; Population; Genetics; Animal science; Demography; Pregnancy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001184944,0.0002419877,0.0003071235,0.000716089,0.0005526337,0.0005214357,0.0003348642,0.0003933659,0.001427484],"category_scores_gemma":[0.0009119274,0.0001641898,0.0006642957,0.001005668,0.000343779,0.0001870684,0.000275604,0.0005438571,0.00008856899],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002390734,"about_ca_system_score_gemma":0.0003282286,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006392299,"about_ca_topic_score_gemma":0.01096954,"domain_scores_codex":[0.9994086,0.0001901423,0.00004274113,0.0002286554,0.00007170363,0.00005806959],"domain_scores_gemma":[0.9991739,0.0003600746,0.0001902667,0.00007428062,0.00006512315,0.0001362689],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006593948,0.00007430252,0.9850963,0.00002875105,0.0009443075,0.0003547565,0.0001918678,0.000151096,0.007583228,0.00007192327,0.0001428961,0.004701283],"study_design_scores_gemma":[0.00001324978,0.00004578629,0.999022,0.000003400594,0.0001951752,0.000114143,0.00005413849,0.0002882232,0.0001183151,0.00002283642,0.000120459,0.000002234797],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991807,0.0002803196,0.0002364497,0.00003870183,0.000004342685,0.000002026197,0.0001151676,0.000004900656,0.0001374062],"genre_scores_gemma":[0.9990784,0.0001073956,0.0003262902,0.00002457933,0.000008863264,0.000005718538,0.0002340614,0.000003821805,0.0002109219],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006392299,"threshold_uncertainty_score":0.01271021,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01715222696224257,"score_gpt":0.2677434484610743,"score_spread":0.2505912214988318,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}