{"id":"W2555332312","doi":"10.1016/j.jneumeth.2016.11.008","title":"RNAseq profiling of primary microglia and astrocyte cultures in near-term ovine fetus: A glial in vivo-in vitro multi-hit paradigm in large mammalian brain","year":2016,"lang":"en","type":"article","venue":"Journal of Neuroscience Methods","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":12,"is_retracted":false,"has_abstract":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University; Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Mertz Gilmore Foundation; Molly Towell Perinatal Research Foundation","keywords":"Microglia; Transcriptome; Astrocyte; Biology; In vivo; Neuroscience; Neuroinflammation; Phenotype; Neuroglia; In vitro; Fetus; Human brain; Gene expression profiling; Cell biology; Inflammation; Central nervous system; Immunology; Gene expression; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002960962,0.0002526745,0.0005686386,0.0008374266,0.00007566361,0.0001033337,0.0005100112,0.00009107088,0.000009520025],"category_scores_gemma":[0.003176328,0.000190543,0.00009304016,0.001072621,0.0002206281,0.0008674623,0.0001454539,0.0004907022,7.483163e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001144469,"about_ca_system_score_gemma":0.0002117369,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007208132,"about_ca_topic_score_gemma":0.00005747403,"domain_scores_codex":[0.995175,0.001882699,0.001302996,0.0005894358,0.0005101087,0.0005397634],"domain_scores_gemma":[0.9982638,0.0006199192,0.0006814648,0.0002297402,0.00004087232,0.0001641831],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003884938,0.0002378312,0.004540721,0.00002961653,2.709583e-7,0.0004486628,0.0003341225,0.0001101679,0.991021,0.0001703748,0.000004756237,0.002714016],"study_design_scores_gemma":[0.003312587,0.0002486573,0.03792076,0.0001135166,0.000002385071,0.000260311,0.0000238318,0.00329913,0.9542912,0.0001441058,0.0002146237,0.0001689451],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9868518,0.00003473973,0.0108957,0.001292285,0.000508182,0.0003629919,0.00002635104,0.00001092595,0.00001708179],"genre_scores_gemma":[0.9438303,0.0001300668,0.05428527,0.001507731,0.00005305672,0.00001114846,2.257625e-7,0.00002708838,0.0001551154],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04338957,"threshold_uncertainty_score":0.7770118,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04906202594662776,"score_gpt":0.3566827622094383,"score_spread":0.3076207362628105,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}