{"id":"W2555868654","doi":"10.1038/srep36419","title":"Listeria monocytogenes sequence type 1 is predominant in ruminant rhombencephalitis","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Institute of Veterinary Bacteriology, University of Bern; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; University of Bern","keywords":"Multilocus sequence typing; Biology; Virulence; Listeria monocytogenes; Microbiology; Pathogen; Tissue tropism; Tropism; Phylogenetics; Genotype; Typing; Listeria; Sequence analysis; Gene; Virology; Genetics; Bacteria; Virus","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001701529,0.0003402673,0.0002525864,0.0007450805,0.0002189353,0.000349946,0.0001498084,0.0003338461,0.001642791],"category_scores_gemma":[0.000715765,0.000192876,0.0001817649,0.0002919426,0.0002381231,0.0001550632,0.0002026787,0.0002626762,0.0003698076],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001010351,"about_ca_system_score_gemma":0.00009517392,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006341346,"about_ca_topic_score_gemma":0.0005704315,"domain_scores_codex":[0.9998104,0.00003131698,0.00002204145,0.0000628144,0.00003177528,0.0000415972],"domain_scores_gemma":[0.9996093,0.00004776704,0.0002172609,0.00002374386,0.00003837194,0.00006362864],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001472369,0.0001028588,0.7092327,0.000178107,0.00007114275,0.006589773,0.0005974605,0.00006749742,0.2672307,0.00006883276,0.0004173121,0.01397114],"study_design_scores_gemma":[0.00001336049,0.000334139,0.9763997,0.00003430094,0.00005048999,0.01355114,0.0004179465,0.0001315688,0.007702855,0.00006601176,0.001291451,0.000007000117],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998874,0.0004849687,0.0001008932,0.00002206864,0.000005903675,0.000004547247,0.00009723796,0.000008794412,0.0004014968],"genre_scores_gemma":[0.999043,0.0002909229,0.0002356878,0.0000307658,0.00001126521,0.000004732311,0.0002009106,0.00000404803,0.0001784907],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001642791,"threshold_uncertainty_score":0.005495667,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07984266010068744,"score_gpt":0.335454778500472,"score_spread":0.2556121183997846,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}