{"id":"W2556870032","doi":"10.1089/fpd.2016.2199","title":"Subtyping <i>Escherichia coli</i> Virulence Genes Isolated from Feces of Beef Cattle and Clinical Cases in Alberta","year":2016,"lang":"en","type":"article","venue":"Foodborne Pathogens and Disease","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Calgary","funders":"","keywords":"Virulence; STX2; Biology; Genotype; Shiga toxin; Microbiology; Escherichia coli; Subtyping; Multiplex polymerase chain reaction; Polymerase chain reaction; Gene; Feces; Virology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005117857,0.0003092478,0.000257244,0.001133528,0.0009977348,0.0007947879,0.0005014036,0.0003308727,0.0005080783],"category_scores_gemma":[0.0009675047,0.0003360336,0.0001850215,0.001072784,0.0008543293,0.0001697208,0.0003540571,0.0002957546,0.00009926606],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005643564,"about_ca_system_score_gemma":0.002339899,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7128584,"about_ca_topic_score_gemma":0.8062556,"domain_scores_codex":[0.9993212,0.00006611436,0.00003649692,0.0001336092,0.0002460754,0.0001964582],"domain_scores_gemma":[0.9993172,0.00008341519,0.0001495256,0.00002624167,0.000225752,0.0001979846],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001488675,0.00003940122,0.9910533,0.0000166319,0.00001628742,0.000603354,0.0007392617,0.00009369403,0.004716559,0.00002368603,0.0001169716,0.002432085],"study_design_scores_gemma":[0.000003424315,0.00005091372,0.997807,0.000007137946,0.000008768201,0.0004134818,0.0009227188,0.000114892,0.0004712836,0.000007829645,0.000189206,0.000003304658],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992498,0.00008269845,0.00006497319,0.00001821303,0.000003032595,0.000006935961,0.0001161131,0.000002894782,0.0004554045],"genre_scores_gemma":[0.9992631,0.0001048675,0.0001310272,0.00003003435,0.000002907881,0.000002307589,0.0002689417,0.00000176476,0.000195037],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2871416,"threshold_uncertainty_score":0.5776653,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01822091177934289,"score_gpt":0.2863548916828896,"score_spread":0.2681339799035468,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}