{"id":"W2557865206","doi":"10.1107/s2053273314095576","title":"Helicobacter pylori Csd4 is a peptidoglycan metallocarboxypeptidase","year":2014,"lang":"en","type":"article","venue":"Acta Crystallographica Section A Foundations and Advances","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Peptidoglycan; Cleave; Carboxypeptidase; Tripeptide; Enzyme; Substrate (aquarium); Cell wall; Zinc; Chemistry; Hydrolase; Biochemistry; Stereochemistry; Crystallography; Biology; Amino acid","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000194921,0.000240007,0.0003348925,0.0005459134,0.000413909,0.0001368834,0.00006211644,0.0001051586,0.0007775781],"category_scores_gemma":[0.00008944972,0.0002084429,0.0002516224,0.0008788925,0.0002612709,0.0005227782,0.00003489607,0.0002275259,0.000005313735],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000284057,"about_ca_system_score_gemma":0.00003476039,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004715938,"about_ca_topic_score_gemma":0.0001700334,"domain_scores_codex":[0.9985532,0.00006491905,0.0003503863,0.0004804668,0.0002775872,0.0002734788],"domain_scores_gemma":[0.9989893,0.00007337912,0.000151711,0.0003245487,0.0001947543,0.0002662415],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004989128,0.001566882,0.04049208,0.0005474987,0.001490283,0.00002802748,0.00126639,0.00003065039,0.8782499,0.007578017,0.004722839,0.06352845],"study_design_scores_gemma":[0.001514466,0.0004235751,0.01434295,0.000187813,0.0002909085,0.0001513212,0.0004845423,0.001294735,0.0003638059,0.001714446,0.9788538,0.0003776289],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9699612,0.000190882,0.00720591,0.008782611,0.0001442553,0.0003391497,0.00002619047,0.0003040878,0.01304575],"genre_scores_gemma":[0.9936782,0.0005696694,0.001415988,0.002583063,0.0003266941,0.00005654886,0.0001276992,0.000024998,0.001217196],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.974131,"threshold_uncertainty_score":0.8513935,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01138846485931135,"score_gpt":0.2660612788566727,"score_spread":0.2546728139973614,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}