{"id":"W2559911342","doi":"10.1104/pp.16.01628","title":"The Plastid Genome of <i>Polytoma uvella</i> Is the Largest Known among Colorless Algae and Plants and Reflects Contrasting Evolutionary Paths to Nonphotosynthetic Lifestyles","year":2016,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University; Canadian Institute for Advanced Research; University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Plastid; Biology; Genome; Gene; Genetics; Nuclear gene; Botany; Chloroplast","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001904391,0.000191686,0.000227729,0.00002616151,0.0002622746,0.00001313697,0.0002467908,0.0001290527,0.000006785545],"category_scores_gemma":[0.0001498307,0.00009863818,0.0000390046,0.0000431127,0.0003280171,0.00000495432,0.0002628403,0.00007285419,0.000003693569],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000700298,"about_ca_system_score_gemma":0.00006205551,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002920316,"about_ca_topic_score_gemma":0.0000727408,"domain_scores_codex":[0.9988244,0.00008688742,0.0002274611,0.0003949319,0.00009544288,0.0003709446],"domain_scores_gemma":[0.9990505,0.0003785363,0.0001424107,0.0002677386,0.00005317027,0.0001076534],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003440221,0.00002754315,0.000288994,0.00002250279,0.00005333638,0.000002625083,0.0001073655,0.000001194263,0.998026,0.0001162534,0.0002202369,0.0007898909],"study_design_scores_gemma":[0.000588613,0.0005661781,0.02308206,0.0001070978,0.00002666195,0.0001507554,0.000171792,0.00009693943,0.9639044,0.0005173034,0.01055103,0.0002372015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974333,0.0009424292,0.0001277687,0.000443939,0.0001144646,0.0002804339,0.0005002798,0.000009944742,0.0001474568],"genre_scores_gemma":[0.9971779,0.002117857,0.00004093875,0.0003535678,0.0001018011,0.00005673508,0.0000226454,0.00001735562,0.0001112006],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03412167,"threshold_uncertainty_score":0.4022348,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005746463866446327,"score_gpt":0.2051670610091119,"score_spread":0.1994205971426656,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}