{"id":"W2559953521","doi":"10.1016/j.funbio.2016.11.007","title":"The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex","year":2016,"lang":"en","type":"article","venue":"Fungal Biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"Acadia University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Office of Science; Mycological Society of America; Carleton University; U.S. Department of Energy","keywords":"Biology; Endophyte; Ascomycota; Mitochondrial DNA; Fungi imperfecti; Evolutionary biology; Botany; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001839334,0.000394449,0.0004827975,0.0008211965,0.0008422714,0.0005792378,0.0002623709,0.0004024144,0.001974415],"category_scores_gemma":[0.0004765354,0.0001811186,0.0002684985,0.00170266,0.0002687823,0.0003796018,0.0002988931,0.0005381071,0.001158076],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003994483,"about_ca_system_score_gemma":0.0009609533,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009187746,"about_ca_topic_score_gemma":0.02617607,"domain_scores_codex":[0.9998506,0.00001100427,0.00001358472,0.0000550364,0.00004231817,0.00002740836],"domain_scores_gemma":[0.9994479,0.0001150792,0.0001292946,0.00007107553,0.0001220004,0.0001146601],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007112253,0.00005279068,0.007283225,0.0006028446,0.00005593692,0.0004933916,0.0003975171,0.0003966941,0.9696018,0.0003349276,0.0008129702,0.0192567],"study_design_scores_gemma":[0.0001583397,0.0005380749,0.7561581,0.000349822,0.0005692922,0.00324617,0.001195475,0.001881397,0.09752911,0.0008344449,0.1374232,0.0001165844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9117615,0.002561648,0.006334268,0.0002417256,0.00007556345,0.00006752618,0.07316417,0.0002179431,0.005575649],"genre_scores_gemma":[0.79263,0.00192524,0.008258547,0.0001324804,0.00003737526,0.00008425174,0.1941233,0.0001340709,0.002674617],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009187746,"threshold_uncertainty_score":0.01826859,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01960240796698441,"score_gpt":0.2326278179330287,"score_spread":0.2130254099660443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}