{"id":"W2560705331","doi":"10.1186/s12864-016-3371-1","title":"Whole genome sequencing and comparative genomics of closely related Fusarium Head Blight fungi: Fusarium graminearum, F. meridionale and F. asiaticum","year":2016,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"Carleton University; Government of Canada; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Genome; Genetics; Indel; Gene; Pseudogene; Fusarium; Single-nucleotide polymorphism; Genomics; Comparative genomics; Reference genome; Genome evolution; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002819289,0.0002785918,0.000456909,0.00002864217,0.0001988886,0.00005966306,0.0002353961,0.000204153,0.00003563319],"category_scores_gemma":[0.0000272183,0.0001045802,0.00009767959,0.0002236921,0.0001996448,0.0001531325,0.000181869,0.0001340598,0.00003263029],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001067724,"about_ca_system_score_gemma":0.00004028324,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005752398,"about_ca_topic_score_gemma":0.0003184669,"domain_scores_codex":[0.9983713,0.00009938742,0.0004980065,0.0004796398,0.0001772282,0.0003744202],"domain_scores_gemma":[0.9990323,0.0002872539,0.0002714616,0.0001172288,0.0001160579,0.0001756955],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005891517,0.00004453103,0.002963466,0.00001861125,0.00004870618,0.000002137359,0.0006148316,0.00001064821,0.9937874,0.001061467,0.00005923519,0.001330065],"study_design_scores_gemma":[0.001972005,0.002008786,0.3704183,0.00007115419,0.0002268975,0.0002357176,0.003590548,0.0004011925,0.4961458,0.003695432,0.1196464,0.001587737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994544,0.002452933,0.00003703472,0.0005994664,0.0001203482,0.0003967518,0.0006508572,0.00004193117,0.001156646],"genre_scores_gemma":[0.9964615,0.0005983867,0.001598422,0.00008498078,0.0001990882,0.00001318974,0.000214709,0.000003115028,0.0008266142],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4976416,"threshold_uncertainty_score":0.4264656,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04765378175432743,"score_gpt":0.2276404926472038,"score_spread":0.1799867108928764,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}