{"id":"W2560754340","doi":"10.1128/jcm.01954-16","title":"Field Validation of SYBR Green- and TaqMan-Based Real-Time PCR Using Biopsy and Swab Samples To Diagnose American Tegumentary Leishmaniasis in an Area Where Leishmania (Viannia) braziliensis Is Endemic","year":2016,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"TaqMan; Leishmania braziliensis; Leishmaniasis; Biology; Leishmania; Virology; Cutaneous leishmaniasis; Polymerase chain reaction; Real-time polymerase chain reaction; Microbiology; Parasite hosting; Immunology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01315231,0.001065354,0.0007286376,0.001009093,0.0005550026,0.000715855,0.0006945308,0.0009164202,0.0008903192],"category_scores_gemma":[0.01188458,0.0008188284,0.0006050178,0.0008684207,0.001527833,0.0004524377,0.000494624,0.0007403317,0.0005392074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005010193,"about_ca_system_score_gemma":0.0008731526,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001619315,"about_ca_topic_score_gemma":0.003051929,"domain_scores_codex":[0.9884434,0.004002709,0.001052195,0.002842285,0.003207289,0.0004520618],"domain_scores_gemma":[0.9933838,0.002856193,0.0007835316,0.0006148024,0.00216957,0.000192047],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002840522,0.001313218,0.177722,0.0007465803,0.0002903976,0.0002827577,0.002836715,0.003262878,0.7625549,0.001042215,0.000566686,0.0465411],"study_design_scores_gemma":[0.0005755756,0.01900616,0.1813559,0.0003962099,0.0009474812,0.003156489,0.001369574,0.04074592,0.7391275,0.001133755,0.01198103,0.0002044164],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8719612,0.002292179,0.1207549,0.0001924116,0.0004000069,0.001189862,0.0006764065,0.0002237636,0.002309368],"genre_scores_gemma":[0.8735963,0.0009461406,0.1205288,0.0003134698,0.00008852182,0.001558948,0.001260658,0.0000491915,0.001657938],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01315231,"threshold_uncertainty_score":0.06955695,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07121479812846346,"score_gpt":0.393470640548998,"score_spread":0.3222558424205345,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}