{"id":"W2561152492","doi":"10.1111/1462-2920.13652","title":"The molecular response of the white‐rot fungus <scp> <i>D</i> </scp> <i>ichomitus squalens</i> to wood and non‐woody biomass as examined by transcriptome and exoproteome analyses","year":2016,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"Concordia University","funders":"Stichting voor de Technische Wetenschappen; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Suomen Kulttuurirahasto; Genome Canada","keywords":"Biology; Fungus; Biomass (ecology); Lignin; Botany; Transcriptome; Polysaccharide; Ecology; Gene; Gene expression; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000888445,0.0004323971,0.0002398416,0.0002107908,0.000117051,0.0003954954,0.0001024987,0.0001987744,0.00066679],"category_scores_gemma":[0.0001133052,0.0001374589,0.0003303026,0.0002541881,0.0001443957,0.0002575517,0.000266502,0.0002933491,0.0002508388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001564898,"about_ca_system_score_gemma":0.0001154124,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001242039,"about_ca_topic_score_gemma":0.00138361,"domain_scores_codex":[0.9998738,0.000009112425,0.00001064617,0.00005098066,0.00002634651,0.00002923717],"domain_scores_gemma":[0.9999238,0.00001185594,0.00002499735,0.000007294846,0.00001303192,0.00001898549],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004250462,0.00001032043,0.0011981,0.00002927404,0.000004109837,0.00003278516,0.00001470792,0.00002941739,0.9980175,0.00001189802,0.00001256655,0.0005967202],"study_design_scores_gemma":[0.00001005,0.0005873824,0.3523461,0.00002092884,0.00004699778,0.0006481622,0.0004800954,0.001056803,0.6416948,0.00009048292,0.002991267,0.00002697548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960001,0.000424823,0.0006874097,0.00003649846,0.00001244469,0.00001840771,0.001902083,0.00002424255,0.0008939285],"genre_scores_gemma":[0.9917884,0.0004806714,0.0012115,0.00009457429,0.000007976309,0.00003604183,0.004076722,0.00001922497,0.002284954],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001242039,"threshold_uncertainty_score":0.002469599,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007991548380926992,"score_gpt":0.2049880251000127,"score_spread":0.1969964767190857,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}