{"id":"W2562411181","doi":"10.1128/genomea.01375-16","title":"Complete Genome Sequence of Dehalococcoides mccartyi Strain WBC-2, Capable of Anaerobic Reductive Dechlorination of Vinyl Chloride","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Ontario Genomics Institute; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science; Government of Canada; U.S. Department of Defense","keywords":"Vinyl chloride; Bioaugmentation; Strain (injury); Whole genome sequencing; Biology; Dehalococcoides; Genome; Reductive dechlorination; Metagenomics; Microbiology; Gene; Genetics; Bioremediation; Ecology; Bacteria; Chemistry; Contamination","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002646905,0.0008891746,0.0007042254,0.001170799,0.0005173656,0.000619644,0.0004747733,0.0006710508,0.001839324],"category_scores_gemma":[0.0007487555,0.0003647547,0.000563254,0.002309205,0.0002149211,0.0004721243,0.000342731,0.0009291476,0.00136896],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006084467,"about_ca_system_score_gemma":0.002133471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0150755,"about_ca_topic_score_gemma":0.01285565,"domain_scores_codex":[0.9997725,0.00001842012,0.00002633083,0.00006939573,0.00007689704,0.00003645526],"domain_scores_gemma":[0.9995292,0.0000888819,0.0001053493,0.00005558746,0.000137191,0.00008388254],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009287947,0.0001555062,0.00371506,0.0008306006,0.00004237907,0.0003845874,0.0003345005,0.0007872395,0.9759396,0.0002829951,0.001806772,0.01479198],"study_design_scores_gemma":[0.0004096791,0.001409208,0.3945785,0.0004705955,0.001004427,0.002674714,0.001136234,0.004929436,0.4165609,0.0009569462,0.1756325,0.0002368858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6296799,0.003509792,0.01269207,0.0005753824,0.000205904,0.000374212,0.3475241,0.0006838327,0.004754786],"genre_scores_gemma":[0.2846776,0.002822283,0.02604703,0.0001894038,0.00006093007,0.0002498642,0.6804681,0.0002862351,0.005198557],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0150755,"threshold_uncertainty_score":0.02997553,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0309806463039537,"score_gpt":0.2558011601655891,"score_spread":0.2248205138616354,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}