{"id":"W2562926429","doi":"10.1038/nature20576","title":"Near-atomic-resolution cryo-EM analysis of the Salmonella T3S injectisome basal body","year":2016,"lang":"en","type":"article","venue":"Nature","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":136,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Bacterial outer membrane; Salmonella enterica; Basal body; Biology; Cryo-electron microscopy; Cell biology; Virulence; Secretion; Effector; Inner membrane; STED microscopy; Salmonella; Biophysics; Microbiology; Cytoplasm; Chemistry; Bacteria; Flagellum; Biochemistry; Escherichia coli; Superresolution; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009645027,0.0001457078,0.0001017345,0.0002151947,0.0004552109,0.0002962713,0.0003421238,0.0003087137,0.001953726],"category_scores_gemma":[0.000127085,0.0001208107,0.0001769605,0.0001834474,0.0002481946,0.0002226996,0.0001998194,0.0007159509,0.0005336112],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003790966,"about_ca_system_score_gemma":0.0002742263,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005853068,"about_ca_topic_score_gemma":0.00635476,"domain_scores_codex":[0.9999768,0.000001420358,9.885678e-7,0.00000583267,0.000007676381,0.000007438537],"domain_scores_gemma":[0.9999293,0.0000149954,0.00001191481,0.000007209926,0.00001882486,0.00001776266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000155841,0.00002776991,0.00210133,0.00004256032,0.000007515339,0.0001297076,0.00006923643,0.0004688411,0.9946533,0.0003897156,0.0003388285,0.001615456],"study_design_scores_gemma":[0.00002406776,0.0001921974,0.1501496,0.00004577313,0.00003439573,0.001024551,0.0008889009,0.01379998,0.8195773,0.0004242782,0.01381208,0.00002697467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9918948,0.0003593431,0.003828459,0.0001562894,0.00001808895,0.000007441054,0.0009088402,0.0001035546,0.002723224],"genre_scores_gemma":[0.9897752,0.0003000019,0.004984587,0.00006767301,0.000006194145,0.000007746486,0.002344948,0.0000761966,0.002437395],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005853068,"threshold_uncertainty_score":0.01163799,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00359966296726285,"score_gpt":0.2246616550401296,"score_spread":0.2210619920728668,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}