{"id":"W2563074666","doi":"10.1099/mic.0.000393","title":"Virulence adaptations of Pseudomonas aeruginosa isolated from patients with non-cystic fibrosis bronchiectasis","year":2016,"lang":"en","type":"article","venue":"Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National University Health System","keywords":"Pseudomonas aeruginosa; Microbiology; Virulence; Cystic fibrosis; Biology; Biofilm; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003477659,0.0001585957,0.0001980809,0.00003565648,0.00005390292,0.000006018824,0.0001283387,0.0001844416,0.00006488634],"category_scores_gemma":[0.00003213107,0.0001041807,0.00005779914,0.00006733789,0.000185544,0.000004842133,0.0000740664,0.00003948904,0.0000233576],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001105827,"about_ca_system_score_gemma":0.00004426284,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001548798,"about_ca_topic_score_gemma":0.0001079402,"domain_scores_codex":[0.9991196,0.0000593269,0.0002183847,0.0003416816,0.00002775201,0.0002332606],"domain_scores_gemma":[0.9993812,0.00003815216,0.0001376619,0.0002794322,0.0001172466,0.00004633861],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003594119,0.00005404615,0.008297796,0.00000315403,0.00006816026,5.708253e-7,0.00002362452,0.000001586792,0.9873486,0.000004304749,0.0003278074,0.003510988],"study_design_scores_gemma":[0.001372888,0.0007315152,0.04032728,0.000058511,0.00004000942,0.000005322454,0.00001035538,0.000002468106,0.9525311,0.000005675607,0.004701327,0.0002135447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966448,0.0001057929,0.002073082,0.00008495036,0.0001503073,0.0001304738,0.0007544417,0.000009270703,0.00004685849],"genre_scores_gemma":[0.9957975,0.00004085349,0.003344404,0.00008996139,0.00006181483,0.000003992547,0.0005769463,0.00001721453,0.00006736481],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03481744,"threshold_uncertainty_score":0.4248365,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004086758048974885,"score_gpt":0.1858606291107712,"score_spread":0.1817738710617963,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}