{"id":"W2563935720","doi":"10.1158/1538-7445.am2015-2969","title":"Abstract 2969: Progress in The Cancer Genome Atlas bladder cancer project","year":2015,"lang":"en","type":"article","venue":"Cancer Research","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Biology; microRNA; PTEN; Bladder cancer; DNA methylation; HRAS; Cancer research; Genetics; Gene; Cancer; Bioinformatics; Mutation; Gene expression; PI3K/AKT/mTOR pathway; Signal transduction","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008347505,0.001207922,0.002043061,0.005891209,0.001230258,0.003448363,0.002509583,0.00122098,0.01210269],"category_scores_gemma":[0.01201008,0.00074522,0.001308376,0.009415396,0.000371432,0.001044253,0.005123804,0.00198349,0.008415468],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002544762,"about_ca_system_score_gemma":0.008184576,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0265157,"about_ca_topic_score_gemma":0.02034966,"domain_scores_codex":[0.9959075,0.001424484,0.0003999846,0.0008357825,0.001093899,0.0003383543],"domain_scores_gemma":[0.9940839,0.0008234538,0.0005121647,0.0009751861,0.002534086,0.001071118],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001228121,0.0001354887,0.0201822,0.003144794,0.001130325,0.0002799325,0.000465843,0.002639268,0.007657414,0.009553634,0.7832478,0.1703351],"study_design_scores_gemma":[0.0003809411,0.0001318513,0.0513543,0.0008448873,0.0008127864,0.0004140862,0.0002076453,0.003300856,0.003459815,0.005843279,0.9331565,0.00009299714],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.02016881,0.01399002,0.02195567,0.01146703,0.001584269,0.0008648646,0.9018562,0.007106794,0.02100631],"genre_scores_gemma":[0.03022708,0.005213802,0.03532013,0.002188381,0.000404326,0.002183624,0.916114,0.00159167,0.006756965],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.0265157,"threshold_uncertainty_score":0.05272269,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2169749846362126,"score_gpt":0.4882951325443409,"score_spread":0.2713201479081283,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}