{"id":"W2563952765","doi":"10.1128/genomea.01442-16","title":"Draft Whole-Genome Sequence of a Catalase-Negative Staphylococcus aureus subsp. <i>aureus</i> (Sequence Type 25) Strain Isolated from a Patient with Endocarditis and Septic Arthritis","year":2016,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; Provincial Laboratory of Public Health; Canadian Science Centre for Human and Animal Health; Université de Saint-Boniface; University of Alberta","funders":"","keywords":"Staphylococcus aureus; Whole genome sequencing; Biology; Microbiology; Catalase; Missense mutation; Strain (injury); Gene; Genome; Bacteria; Mutation; Genetics; Enzyme","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006719557,0.001952216,0.001908069,0.002588878,0.001156089,0.001460382,0.001153127,0.00228774,0.007006373],"category_scores_gemma":[0.002561465,0.0009397366,0.001847459,0.00463815,0.0004638075,0.0007557711,0.0008630184,0.002599842,0.006456023],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007322755,"about_ca_system_score_gemma":0.003709562,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01308797,"about_ca_topic_score_gemma":0.01376667,"domain_scores_codex":[0.9996171,0.0000421759,0.00005298708,0.0001020533,0.0001246675,0.00006102906],"domain_scores_gemma":[0.9982477,0.000496444,0.0003639454,0.000125378,0.0004382327,0.0003283144],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005577737,0.0005758246,0.01050141,0.008835009,0.0006546071,0.007051274,0.001967649,0.003319563,0.8415995,0.001302038,0.07539299,0.04322235],"study_design_scores_gemma":[0.001940685,0.002473905,0.3062167,0.002380412,0.003755348,0.009433087,0.002457356,0.008533619,0.1175385,0.004309153,0.5401362,0.0008249295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.1330046,0.005252897,0.01809967,0.001755582,0.001403423,0.0004723473,0.8321348,0.002540967,0.005335669],"genre_scores_gemma":[0.0527681,0.001777254,0.02506388,0.0002556074,0.0001723171,0.0002206335,0.9168118,0.000668538,0.002261869],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01308797,"threshold_uncertainty_score":0.02602357,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01794438611923069,"score_gpt":0.2459682934364159,"score_spread":0.2280239073171852,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}