{"id":"W2564569826","doi":"10.1111/mmi.13602","title":"Functional relatedness in the Inv/Mxi‐Spa type III secretion system family","year":2016,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Effector; Type three secretion system; Complementation; Chaperone (clinical); Salmonella enterica; Secretion; Translocon; Cell biology; Genetics; Biogenesis; Protein-fragment complementation assay; Mutant; Salmonella; Gene; Biochemistry; Chromosomal translocation; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003119599,0.0002576544,0.0002069504,0.0005643005,0.0001901031,0.0003514476,0.0002072225,0.0003746769,0.0008326045],"category_scores_gemma":[0.0004641469,0.0001171822,0.0002580633,0.0003953262,0.0003797683,0.0003299894,0.0004243167,0.0004296428,0.0003817868],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001878443,"about_ca_system_score_gemma":0.000191251,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003456672,"about_ca_topic_score_gemma":0.0002014142,"domain_scores_codex":[0.9996704,0.00009128841,0.00002708804,0.00007823622,0.00007207637,0.00006098333],"domain_scores_gemma":[0.9995574,0.00008716314,0.0001099136,0.00006999041,0.00009637891,0.00007914112],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002016457,0.00005054939,0.01184086,0.00005438323,0.00001410352,0.0001577662,0.0001320892,0.0001012587,0.9824916,0.0002854201,0.00003825123,0.0046321],"study_design_scores_gemma":[0.00002718349,0.001318944,0.7318764,0.00004489054,0.0001484867,0.007380231,0.001097788,0.0018989,0.2427214,0.001311449,0.01212955,0.00004485661],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964049,0.0007053906,0.001380475,0.0000645765,0.000004813946,0.000008880545,0.0001870106,0.00001770769,0.001226294],"genre_scores_gemma":[0.9972202,0.00033278,0.001027509,0.00004691695,0.000005235289,0.00001070975,0.000813373,0.000008239565,0.0005352128],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008326045,"threshold_uncertainty_score":0.002785385,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01892147936216307,"score_gpt":0.1971938202643733,"score_spread":0.1782723409022103,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}