{"id":"W2565188266","doi":"10.1111/ajt.14191","title":"BK Polyomavirus Genomic Integration and Large T Antigen Expression: Evolving Paradigms in Human Oncogenesis","year":2016,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec","funders":"","keywords":"BK virus; Carcinogenesis; Merkel cell polyomavirus; Biology; Virology; Polyomavirus Infections; Oncovirus; Virus; Antigen; Cancer research; Gene; Genetics; Merkel cell carcinoma; Kidney; Carcinoma; Kidney transplantation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001647192,0.0001050149,0.0002625948,0.0002397559,0.00005843785,0.00001188506,0.00004956757,0.00004052228,0.00003988922],"category_scores_gemma":[0.00001486454,0.0000643649,0.00007411338,0.000126162,0.00008789757,0.0002111172,0.000003686963,0.00009624474,0.000002518088],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005940221,"about_ca_system_score_gemma":0.00006911384,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007956653,"about_ca_topic_score_gemma":0.00002361068,"domain_scores_codex":[0.9990997,0.0000738706,0.0003831221,0.0001154741,0.0001692828,0.0001586074],"domain_scores_gemma":[0.9994061,0.00006439987,0.0002669561,0.00007339306,0.0000480028,0.000141123],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006183741,0.0001087059,0.1697306,0.00001978745,0.00004288062,0.0002142537,0.0008071377,0.000001820811,0.7674725,0.00003957703,0.00002120037,0.06092312],"study_design_scores_gemma":[0.003716887,0.0008155068,0.882395,0.001337988,0.0002181534,0.0006819497,0.0005071257,0.00003199702,0.1099186,0.00008110161,0.0001468396,0.0001488423],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936359,0.001867908,0.003915187,0.0002864827,0.00005922545,0.00008186842,0.00002093333,0.00000947233,0.000123046],"genre_scores_gemma":[0.9955401,0.003717316,0.0005141145,0.00009443064,0.00008816463,0.000001978221,0.000007548781,0.00001371846,0.00002266671],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7126644,"threshold_uncertainty_score":0.2624725,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009074589484218326,"score_gpt":0.276473087475139,"score_spread":0.2673984979909206,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}