{"id":"W2565894557","doi":"10.1534/genetics.116.193870","title":"Multiple Transcriptional and Post-transcriptional Pathways Collaborate to Control Sense and Antisense RNAs of <i>Tf2</i> Retroelements in Fission Yeast","year":2016,"lang":"en","type":"article","venue":"Genetics","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Biology; Genetics; Yeast; Schizosaccharomyces; Sense (electronics); Transcriptional regulation; Computational biology; Saccharomyces cerevisiae; Schizosaccharomyces pombe; Gene; Transcription factor","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001117507,0.0001297326,0.0001380232,0.00005873554,0.00002756479,0.00000891392,0.00003749248,0.00008902967,0.000007826666],"category_scores_gemma":[0.00004142928,0.0001117283,0.00002795417,0.0000680146,0.00005245341,0.00000300482,0.00002755954,0.00003438883,0.000001080303],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007730489,"about_ca_system_score_gemma":0.00003623441,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006016182,"about_ca_topic_score_gemma":0.0001019908,"domain_scores_codex":[0.9991758,0.00003303834,0.0002225121,0.0002559607,0.0001224914,0.0001902226],"domain_scores_gemma":[0.9996096,0.00001351622,0.00003197678,0.0001346078,0.0000944456,0.0001158904],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001828962,0.00003108305,0.01384325,0.00002312301,0.00001771236,0.000004890653,0.0000914557,0.0001773776,0.9832317,0.00003150198,0.00009302894,0.002271927],"study_design_scores_gemma":[0.00337475,0.000485197,0.2846145,0.00006563308,0.00001994494,0.00003594885,0.00007815505,0.0002622056,0.7021151,0.00003253738,0.008689271,0.0002268019],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9856067,0.001240297,0.01191596,0.0002753065,0.00008664445,0.0002138325,0.0006392418,0.000004783478,0.00001721571],"genre_scores_gemma":[0.9968364,0.0006624574,0.002157894,0.0001674778,0.00005954257,0.000008698848,0.00003089045,0.00001652198,0.00006016554],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2811167,"threshold_uncertainty_score":0.4556147,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006427912769358209,"score_gpt":0.2395232429137731,"score_spread":0.2330953301444149,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}