{"id":"W2566391670","doi":"10.1093/ve/vew034","title":"Geography and host species shape the evolutionary dynamics of U genogroup infectious hematopoietic necrosis virus","year":2016,"lang":"en","type":"article","venue":"Virus Evolution","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Oncorhynchus; Infectious hematopoietic necrosis virus; Chinook wind; Biology; Rainbow trout; Host (biology); Trout; Fishery; Salmonidae; Virus; Ross River virus; Aquaculture; Zoology; Virology; Ecology; Alphavirus; Fish <Actinopterygii>","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003152373,0.0001642008,0.0001733292,0.000718509,0.0004209145,0.0007183108,0.0001979045,0.0002504068,0.0007108942],"category_scores_gemma":[0.0009684777,0.0001670024,0.0001846777,0.0005675228,0.0004688833,0.0004244276,0.0005793875,0.0003433458,0.0001273586],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004061011,"about_ca_system_score_gemma":0.0003381008,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01411945,"about_ca_topic_score_gemma":0.03026989,"domain_scores_codex":[0.9997743,0.00005856884,0.000009765375,0.00006868615,0.00001960591,0.00006901602],"domain_scores_gemma":[0.999542,0.0001029082,0.0001776741,0.0000293544,0.00005496015,0.00009322424],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001028597,0.00001467349,0.9868401,0.000008352448,0.00002909231,0.0001060709,0.0009512955,0.0002331075,0.007931895,0.0001245059,0.00006895051,0.003589118],"study_design_scores_gemma":[0.000002069237,0.00002513973,0.9972653,0.000008190845,0.000009829802,0.0001062625,0.001424952,0.0005475692,0.0002233324,0.00005945806,0.0003230514,0.000004895532],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995598,0.00004830066,0.00007412627,0.000009796297,8.30928e-7,0.000001724572,0.00002114086,0.000001046039,0.0002831663],"genre_scores_gemma":[0.9997341,0.00005763255,0.00007694199,0.00000783531,0.000001193793,0.000001455674,0.00004949953,0.000002356294,0.00006905276],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01411945,"threshold_uncertainty_score":0.0280745,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005653807127552304,"score_gpt":0.1929461131495497,"score_spread":0.1872923060219973,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}