{"id":"W2566391670","doi":"10.1093/ve/vew034","title":"Geography and host species shape the evolutionary dynamics of U genogroup infectious hematopoietic necrosis virus","year":2016,"lang":"en","type":"article","venue":"Virus Evolution","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Oncorhynchus; Infectious hematopoietic necrosis virus; Chinook wind; Biology; Rainbow trout; Host (biology); Trout; Fishery; Salmonidae; Virus; Ross River virus; Aquaculture; Zoology; Virology; Ecology; Alphavirus; Fish <Actinopterygii>","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001439396,0.0002007076,0.0002119567,0.00015968,0.0003408297,0.00001518292,0.0001923421,0.0001766974,0.0005247428],"category_scores_gemma":[0.00003568207,0.0001203924,0.0001452021,0.0002441259,0.0007441411,0.0001490954,0.0001796075,0.0001121405,0.0001995493],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000101168,"about_ca_system_score_gemma":0.00002283375,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002837511,"about_ca_topic_score_gemma":0.0002738346,"domain_scores_codex":[0.9990059,0.0001163301,0.0002746009,0.0002519599,0.00005054856,0.0003007133],"domain_scores_gemma":[0.9993447,0.00008181523,0.000168348,0.0002964186,0.00008580623,0.00002291922],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001355753,0.0001812425,0.03402936,0.00004371256,0.0002920899,0.000001075003,0.0002262235,8.175261e-7,0.9311762,0.02169423,0.009993595,0.002225889],"study_design_scores_gemma":[0.002619409,0.0003473784,0.9178642,0.0001844013,0.0005230929,0.00007838481,0.0007837713,0.00004192171,0.02658772,0.003906959,0.04642208,0.0006406964],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9821863,0.0116056,0.002288619,0.0007586399,0.0005011546,0.0004555882,0.0004215145,0.0001245445,0.001658057],"genre_scores_gemma":[0.9966426,0.001027565,0.00001871252,0.00008458177,0.00003187041,0.00002412692,0.00008254105,0.00001514479,0.002072808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9045885,"threshold_uncertainty_score":0.5745566,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005653807127552304,"score_gpt":0.1929461131495497,"score_spread":0.1872923060219973,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}