{"id":"W2567455682","doi":"10.1038/cddis.2016.431","title":"Rab17 mediates differential antigen sorting following efferocytosis and phagocytosis","year":2016,"lang":"en","type":"article","venue":"Cell Death and Disease","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Ontario Ministry of Research and Innovation; Canadian Institutes of Health Research","keywords":"Efferocytosis; Phagosome; Phagocytosis; Cell biology; Endosome; Antigen presentation; Antigen; Antigen processing; Phagolysosome; Macrophage; Biology; Cross-presentation; MHC class II; MHC class I; Immune system; Major histocompatibility complex; Immunology; Intracellular; T cell; Biochemistry; In vitro","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009574997,0.0002124739,0.0002714545,0.00007925511,0.0003416387,0.00003817859,0.0000900641,0.0001131889,0.0001656511],"category_scores_gemma":[0.0001197269,0.0001417209,0.0001228303,0.00004449182,0.00009815903,0.0001866987,0.0001158901,0.00006412722,0.00005135407],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000016854,"about_ca_system_score_gemma":0.00003661958,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001781186,"about_ca_topic_score_gemma":0.00000101968,"domain_scores_codex":[0.99889,0.00009511907,0.0002451987,0.0003677009,0.00004434373,0.0003575807],"domain_scores_gemma":[0.999367,0.0001562035,0.00009275276,0.0001945448,0.00002051605,0.0001689965],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001954384,0.00007564561,0.1892213,0.00003667032,0.00007933188,0.000006089419,0.0000869088,9.295132e-8,0.7916793,0.0001389548,0.0002011983,0.01827913],"study_design_scores_gemma":[0.005180122,0.0001091287,0.6023157,0.0001410438,0.0003412023,0.000005996374,0.00005951403,0.00002617962,0.3890455,0.0009429323,0.001386195,0.0004464663],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9828077,0.01584508,0.0003680602,0.0001915675,0.000316879,0.0001755745,0.00002850594,0.00006475395,0.0002018722],"genre_scores_gemma":[0.9980572,0.001153589,0.0000206158,0.00008028069,0.00004805117,0.00002264097,0.00005300086,0.00001871127,0.0005459095],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4130944,"threshold_uncertainty_score":0.5779212,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0102668355585334,"score_gpt":0.2220869593483712,"score_spread":0.2118201237898378,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}