{"id":"W2569839159","doi":"10.1101/027953","title":"Modular Combinatorial Binding among Human <i>Trans</i> -acting Factors Reveals Direct and Indirect Factor Binding","year":2015,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"National Institutes of Health","keywords":"Modular design; Factor (programming language); Chemistry; Mathematics; Computer science; Programming language","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001658586,0.0001520108,0.0002749321,0.0003376979,0.0001571305,0.0003716941,0.0001498428,0.0001553677,0.001331349],"category_scores_gemma":[0.0003355414,0.0002429464,0.0003139401,0.0003216045,0.0001968786,0.0001670825,0.0002192712,0.00026251,0.0002975536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000279314,"about_ca_system_score_gemma":0.0001673992,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001921698,"about_ca_topic_score_gemma":0.002698999,"domain_scores_codex":[0.9998442,0.0000181396,0.000008053038,0.0000830065,0.00002639387,0.00002013355],"domain_scores_gemma":[0.9998117,0.00007370953,0.0000529016,0.00002448532,0.00001417446,0.00002301244],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003879575,0.00003588894,0.03040722,0.0001207144,0.00005339854,0.0001034001,0.00008388865,0.009956696,0.9435131,0.001202661,0.0003057299,0.01382934],"study_design_scores_gemma":[0.00006255505,0.0002433643,0.2881826,0.00002536444,0.0001705044,0.0007549506,0.0001785865,0.2308792,0.470015,0.003916335,0.00551058,0.00006104049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9779698,0.0003473508,0.02005419,0.00002702212,0.000002687631,0.000009167477,0.0005362126,0.0003047448,0.0007488137],"genre_scores_gemma":[0.9894887,0.00009249322,0.009302798,0.00002218034,0.000002931889,0.000009939824,0.0006360034,0.00003378072,0.0004112474],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001921698,"threshold_uncertainty_score":0.004453838,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0152983856605312,"score_gpt":0.2237248740293952,"score_spread":0.208426488368864,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}