{"id":"W2570350339","doi":"10.1007/978-3-319-48344-3_8","title":"Retrotransposon-Derived Regulatory Regions and Transcripts in Stemness","year":2017,"lang":"en","type":"book-chapter","venue":"","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; McGill University","funders":"","keywords":"Retrotransposon; Induced pluripotent stem cell; Biology; Transposable element; Embryonic stem cell; Computational biology; Gene; Human genome; Stem cell; Transcription factor; Genetics; RNA; Regulatory sequence; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001203111,0.0003840752,0.0002192634,0.0003331333,0.0001813633,0.0009146229,0.0004300068,0.0004028581,0.005841918],"category_scores_gemma":[0.0001159841,0.0001524385,0.0001177902,0.0007139872,0.0006323439,0.001057661,0.000344717,0.0009235888,0.002094419],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004296665,"about_ca_system_score_gemma":0.0002398615,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004126951,"about_ca_topic_score_gemma":0.000914836,"domain_scores_codex":[0.9999592,0.000005149343,0.000002221103,0.00001378715,0.00001621178,0.000003396851],"domain_scores_gemma":[0.9999754,0.00001410494,0.000002307658,0.000001998493,0.000003494473,0.000002751848],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008437272,0.00003441717,0.0002462563,0.0004128314,0.00001108713,0.0002735088,0.0004824869,0.00123858,0.08060814,0.3260154,0.0190087,0.5715842],"study_design_scores_gemma":[0.000007733899,0.00003622969,0.001259998,0.000188166,0.00001255013,0.0007166672,0.0001688425,0.0008302139,0.01776708,0.1755722,0.8034216,0.00001862526],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"other","genre_scores_codex":[0.02719407,0.4705683,0.0567333,0.0025419,0.002468924,0.00004513704,0.000421381,0.0002918289,0.4397351],"genre_scores_gemma":[0.1282146,0.232079,0.01843313,0.001376115,0.001850118,0.00008591759,0.0009521199,0.0002750939,0.6167338],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.005841918,"threshold_uncertainty_score":0.01954311,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03485339001453122,"score_gpt":0.2079917817517267,"score_spread":0.1731383917371954,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}