{"id":"W2575872105","doi":"10.1186/s12864-017-3862-8","title":"Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture","year":2017,"lang":"en","type":"editorial","venue":"BMC Genomics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland; University of British Columbia; Agriculture and Agri-Food Canada; University of Victoria; Simon Fraser University; Genome British Columbia; University of Alberta; Université Laval; Interface Biologics (Canada)","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Natural Environment Research Council; Fiskeri - og havbruksnæringens forskningsfond; U.S. Department of Agriculture; Norges Forskningsråd; National Institute of Food and Agriculture; Genome British Columbia; Corporación de Fomento de la Producción","keywords":"Biology; Genome; Aquaculture; Evolutionary biology; Genomics; Leverage (statistics); Computational biology; Data science; Fishery; Fish <Actinopterygii>; Genetics; Gene; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008280261,0.000336479,0.0003669381,0.0001274033,0.0003399289,0.0001344709,0.0004793706,0.000803159,0.00001048259],"category_scores_gemma":[0.0006226204,0.0003425115,0.0001203526,0.00004347681,0.000296643,0.00001025319,0.0003912395,0.0004291385,0.000003408618],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007486324,"about_ca_system_score_gemma":0.0009321485,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001220575,"about_ca_topic_score_gemma":0.0010406,"domain_scores_codex":[0.9977735,0.0001661756,0.0005228997,0.0007201646,0.0004775818,0.0003396314],"domain_scores_gemma":[0.9970685,0.000126387,0.0007252644,0.0005127115,0.001462225,0.0001048854],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008515773,0.0001615755,0.01018704,0.0002385974,0.0008472459,0.000006033279,0.002053741,0.0001502089,0.238261,0.0002324021,0.7442341,0.00277643],"study_design_scores_gemma":[0.0008153135,0.000432549,0.01727567,0.00002480914,0.00008794196,0.000006216497,0.001116165,0.00008359439,0.005112408,0.0005528168,0.9740821,0.0004104198],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"editorial","genre_scores_codex":[0.7680819,0.00506467,0.0001861395,0.0004270426,0.2208678,0.0007789425,0.003620557,0.000009415568,0.0009635076],"genre_scores_gemma":[0.2173171,0.01628978,0.006302177,0.0001901301,0.7351438,0.0001431221,0.02235558,0.0001810344,0.00207721],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.5507648,"threshold_uncertainty_score":0.9999027,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05814141980042823,"score_gpt":0.3425802188822468,"score_spread":0.2844387990818185,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}