{"id":"W2577415758","doi":"10.1038/bjc.2016.426","title":"Enrichment of putative PAX8 target genes at serous epithelial ovarian cancer susceptibility loci","year":2017,"lang":"en","type":"article","venue":"British Journal of Cancer","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Vancouver General Hospital; BC Cancer Agency","funders":"National Cancer Institute; Cancer Council Tasmania; Cancer Council Queensland; Cancer Council NSW; Cancer Council Victoria; Cancer Council South Australia; National Health and Medical Research Council; National Center for Advancing Translational Sciences; Medical Research Council; Helse Vest; Bundesministerium für Bildung und Forschung; National Institute for Health and Care Research; Lon V. Smith Foundation; Norges Forskningsråd; University of Cambridge; Cancer Research UK; American Cancer Society; Minnesota Ovarian Cancer Alliance; Imperial College London; Kreftforeningen; Helsingin ja Uudenmaan Sairaanhoitopiiri; WorkSafeBC; Rutgers Cancer Institute of New Jersey; Francis Crick Institute; Mayo Foundation for Medical Education and Research; European Commission; Oregon Health and Science University; Universität Ulm; Kræftens Bekæmpelse; National Center for Research Resources; Oak Foundation; Roswell Park Cancer Institute; Ovarian Cancer Research Fund","keywords":"PAX8; Genome-wide association study; Biology; Gene; Genetics; Carcinogenesis; Serous fluid; Transcriptome; Cancer research; Single-nucleotide polymorphism; Transcription factor; Gene expression; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002718931,0.0001014322,0.0002128215,0.00001863498,0.0002023275,0.00002309716,0.0002201444,0.000128419,0.0001608594],"category_scores_gemma":[0.00004852362,0.0001029332,0.0001128805,0.00002053967,0.0001912304,0.00001248958,0.0001097602,0.00007887063,0.000001219951],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007756837,"about_ca_system_score_gemma":0.0002213448,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005195885,"about_ca_topic_score_gemma":0.002079307,"domain_scores_codex":[0.9991246,0.00006274441,0.0003299122,0.0001776425,0.0001443637,0.0001607797],"domain_scores_gemma":[0.9988936,0.000005679913,0.0005876618,0.000145362,0.0002979549,0.0000697858],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004320914,0.00006569569,0.1743743,0.00002930222,0.0003047682,0.0000262985,0.00009569059,0.0003022536,0.6664804,0.000003812487,0.001152546,0.1567329],"study_design_scores_gemma":[0.0007958883,0.0001266453,0.4298,0.0000422693,0.00002843869,0.0001100074,0.00002491186,0.000004590486,0.5512527,0.0001283986,0.01757502,0.0001111267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9851632,0.01335632,0.0002433526,0.0002669525,0.0005088173,0.00009597972,0.0001906142,0.000001496227,0.0001733216],"genre_scores_gemma":[0.991809,0.005982414,0.0007846221,0.0000896798,0.0004163861,0.000009004048,0.00003792304,0.000009546568,0.0008614978],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2554257,"threshold_uncertainty_score":0.4197492,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01009224372729,"score_gpt":0.2886254201860975,"score_spread":0.2785331764588075,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}