{"id":"W2578472495","doi":"10.1371/journal.ppat.1006118","title":"Multiple Acid Sensors Control Helicobacter pylori Colonization of the Stomach","year":2017,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Defense Science and Engineering Graduate; U.S. Department of Defense","keywords":"Stomach; Helicobacter pylori; Biology; Colonization; Bacteria; Gastric acid; Microbiology; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001486897,0.0004746276,0.0005140209,0.0002783907,0.000142684,0.0006293167,0.0003472489,0.0005177715,0.0009861698],"category_scores_gemma":[0.0002556579,0.000370396,0.0003218812,0.0001353963,0.0003915012,0.0004456492,0.0007159642,0.0007345015,0.0005145263],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004752992,"about_ca_system_score_gemma":0.0002064227,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000643654,"about_ca_topic_score_gemma":0.0006352009,"domain_scores_codex":[0.9997174,0.00002368236,0.00002639923,0.00007184807,0.00009275998,0.00006780474],"domain_scores_gemma":[0.9997085,0.00002536775,0.00008636866,0.00002175064,0.00004626333,0.000111734],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007948987,0.000009429806,0.0003576172,0.00002018424,0.000002682112,0.00004709205,0.00001010602,0.0000452657,0.9984823,0.00003285944,0.00002668838,0.0008862201],"study_design_scores_gemma":[0.00003662346,0.000290827,0.04001456,0.00001432227,0.00003366814,0.0005344197,0.0001522591,0.005053317,0.9515218,0.0001264513,0.002195442,0.00002628104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917359,0.002822247,0.003761002,0.0001630353,0.00004425771,0.00003040532,0.0001969174,0.0002224411,0.001023847],"genre_scores_gemma":[0.9948643,0.0007187289,0.001944533,0.0001066296,0.00001007851,0.00003191187,0.0001922653,0.00004497103,0.002086559],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009861698,"threshold_uncertainty_score":0.003448606,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02234220694846821,"score_gpt":0.2524472841873472,"score_spread":0.230105077238879,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}