{"id":"W2579064605","doi":"10.7150/ijbs.17390","title":"Metadata Analysis of <i>Phanerochaete chrysosporium </i>Gene Expression Data Identified Common CAZymes Encoding Gene Expression Profiles Involved in Cellulose and Hemicellulose Degradation","year":2017,"lang":"en","type":"article","venue":"International Journal of Biological Sciences","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phanerochaete; Hemicellulose; Chrysosporium; Glycoside hydrolase; Cellulose; Biology; Transcriptome; Biochemistry; Lignin; Gene; Gene expression; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002093976,0.0003936009,0.0003999256,0.001815399,0.0005992294,0.0007340609,0.0001908998,0.0002035118,0.001255735],"category_scores_gemma":[0.0006064504,0.00010648,0.0005654053,0.002663898,0.0001977372,0.0004357876,0.0004368942,0.0003297702,0.0006264962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004618992,"about_ca_system_score_gemma":0.001058279,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004520404,"about_ca_topic_score_gemma":0.009422595,"domain_scores_codex":[0.9996185,0.00001989138,0.00003901874,0.0001507291,0.0001010642,0.00007083639],"domain_scores_gemma":[0.9995159,0.00009558717,0.0001378171,0.00005810407,0.0001284427,0.00006416556],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0003857246,0.0000530276,0.03614383,0.0005923574,0.00006432742,0.0003727375,0.0002052146,0.0008766652,0.9265659,0.0004026127,0.001183471,0.03315423],"study_design_scores_gemma":[0.00002321669,0.00040901,0.608025,0.000141255,0.0002269746,0.001448485,0.001027263,0.006660935,0.3362663,0.001318488,0.0443486,0.0001043597],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7993557,0.002090341,0.02010383,0.0002826771,0.00007397281,0.0001757291,0.170931,0.001483957,0.005502739],"genre_scores_gemma":[0.7756736,0.001517914,0.02495473,0.00018644,0.00002967091,0.0002050401,0.1942635,0.0002166449,0.00295245],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004520404,"threshold_uncertainty_score":0.008988202,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08765872426866572,"score_gpt":0.311046920597696,"score_spread":0.2233881963290302,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}