{"id":"W2582554735","doi":"10.1128/genomea.01517-16","title":"Whole-Genome Sequence and Annotation of Salmonella enterica subsp. <i>enterica</i> Serovar Enteritidis Phage Type 8 Strain EN1660","year":2017,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; Government of Canada; University of Calgary","keywords":"Biology; Salmonella enterica; Whole genome sequencing; Subspecies; Serotype; Strain (injury); Genome; Microbiology; Virology; Genetics; Salmonella; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002098617,0.0006806913,0.0004721516,0.0009454465,0.0004440617,0.0003701704,0.0002723542,0.0002845673,0.001701921],"category_scores_gemma":[0.0004108701,0.0002151803,0.0004869484,0.001215471,0.0001527748,0.0002057491,0.0002805491,0.0004480283,0.001216842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006005112,"about_ca_system_score_gemma":0.001872314,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03774543,"about_ca_topic_score_gemma":0.05638631,"domain_scores_codex":[0.9998875,0.000007582228,0.000009757189,0.00003763341,0.00003538897,0.00002212892],"domain_scores_gemma":[0.9997624,0.00002419895,0.00003439797,0.00001703855,0.0001106988,0.00005123915],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001036875,0.00009598001,0.00587599,0.0005926381,0.00003565014,0.0002757601,0.0002832304,0.0007673097,0.9758749,0.0001209888,0.001837978,0.01320274],"study_design_scores_gemma":[0.0002570284,0.0009391326,0.6324633,0.0002626935,0.0004222876,0.001331524,0.001040124,0.00805027,0.2508875,0.0003832558,0.1038497,0.0001132553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8548988,0.001158575,0.00712581,0.000110274,0.00006651497,0.0001675674,0.1326659,0.0005255524,0.003280939],"genre_scores_gemma":[0.4548467,0.001718357,0.0639382,0.0001736845,0.00002876557,0.0002957673,0.4647639,0.0004029492,0.01383156],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03774543,"threshold_uncertainty_score":0.07505149,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02913922871079543,"score_gpt":0.2761182385559982,"score_spread":0.2469790098452028,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}