{"id":"W2583820511","doi":"10.1093/ofid/ofw172.44","title":"Evaluation of the Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry for the Identification of Cystic Fibrosis Pathogens","year":2016,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Enterobacteriaceae and Cronobacter Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Medicine; Mass spectrometry; Cystic fibrosis; Identification (biology); Time-of-flight mass spectrometry; Pathogenic organism; Chromatography; Ionization; Microbiology; Internal medicine; Biology; Physics; Chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003218432,0.0008593259,0.0004569612,0.001766915,0.0006805424,0.0008210251,0.0007192557,0.001105091,0.001345891],"category_scores_gemma":[0.002977642,0.0002907773,0.0004647605,0.0007599783,0.000453665,0.0007481563,0.0005009345,0.0005298781,0.0007426374],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000681972,"about_ca_system_score_gemma":0.0008791559,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002008755,"about_ca_topic_score_gemma":0.004087084,"domain_scores_codex":[0.9979975,0.0003523936,0.000101128,0.000322658,0.001120772,0.0001054898],"domain_scores_gemma":[0.998393,0.0004207917,0.0002438952,0.00004695855,0.0007690252,0.0001264121],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001156697,0.0003715449,0.04914396,0.0007731533,0.0001636582,0.0004942602,0.0002259836,0.0009179633,0.8848028,0.0002935634,0.001195923,0.06046054],"study_design_scores_gemma":[0.00009598447,0.002796431,0.1768207,0.0002088974,0.0003254758,0.005276682,0.0005599725,0.04292209,0.7603048,0.0004988827,0.009984166,0.0002059739],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9355766,0.01900632,0.03407537,0.001009922,0.0003614282,0.0007293941,0.002433083,0.00066478,0.006143023],"genre_scores_gemma":[0.9285932,0.00456217,0.06205137,0.0009063018,0.00008852984,0.0003021414,0.001129518,0.00005895363,0.002307852],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003218432,"threshold_uncertainty_score":0.01702088,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01396776947617231,"score_gpt":0.2972054661923116,"score_spread":0.2832376967161393,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}