{"id":"W2584563445","doi":"10.1093/ibd/izx013","title":"Long ncRNA Landscape in the Ileum of Treatment-Naive Early-Onset Crohn Disease","year":2018,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"ca_institutions":"Children's Hospital of Eastern Ontario; SickKids Foundation; Dalhousie University; Hospital for Sick Children; University of Toronto","funders":"National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; Israel Science Foundation; Crohn's and Colitis Foundation","keywords":"Biology; Long non-coding RNA; Gene expression; In situ hybridization; Gene; Regulation of gene expression; Inflammatory bowel disease; Computational biology; Disease; Cancer research; Downregulation and upregulation; Genetics; Pathology; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001255277,0.0002182389,0.000156179,0.0001094405,0.0001017364,0.0000381866,0.0003888578,0.0001068473,0.0001271229],"category_scores_gemma":[0.0001464673,0.0001687785,0.0001829733,0.0001454737,0.0002906036,0.000009632298,0.0001155841,0.00008503529,0.00004468982],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000469798,"about_ca_system_score_gemma":0.0004304004,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006065652,"about_ca_topic_score_gemma":0.000173475,"domain_scores_codex":[0.9985383,0.0001626266,0.0002644893,0.0003859787,0.0002795265,0.0003690777],"domain_scores_gemma":[0.9988127,0.00003154166,0.00009520374,0.0007255515,0.0001278226,0.0002071404],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.008076407,0.001395588,0.8953712,0.0003372563,0.0007145009,0.002462378,0.001332942,0.0005887604,0.07146065,0.0004705599,0.01195516,0.005834606],"study_design_scores_gemma":[0.001517367,0.000596557,0.9707012,0.00006861946,0.00009627921,0.00000987885,0.0001598641,0.0001559172,0.02264133,0.0002528953,0.003504837,0.0002953042],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968531,0.001600426,0.0001707779,0.00006719918,0.0001122821,0.0004889106,0.0002500079,0.00001643609,0.0004408196],"genre_scores_gemma":[0.9987071,0.0002515211,0.00001337843,0.0001400745,0.0003086927,0.0001488866,0.0001512156,0.00003313185,0.0002460047],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07532996,"threshold_uncertainty_score":0.6882586,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00894966718308662,"score_gpt":0.2622269020378298,"score_spread":0.2532772348547432,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}