{"id":"W2586568662","doi":"10.1007/s10126-017-9730-3","title":"De Novo Transcriptome Characterization and Growth-Related Gene Expression Profiling of Diploid and Triploid Bighead Catfish (Clarias macrocephalus Günther, 1864)","year":2017,"lang":"en","type":"article","venue":"Marine Biotechnology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"ca_institutions":"Fisheries and Oceans Canada","funders":"Fisheries and Oceans Canada; Royal Golden Jubilee (RGJ) Ph.D. Programme; Thailand Research Fund","keywords":"Biology; Catfish; KEGG; Ploidy; Transcriptome; Genetics; Gene; Gene expression profiling; De novo transcriptome assembly; Genome; Gene expression; Fishery; Fish <Actinopterygii>","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001413285,0.0001748783,0.0002129642,0.0001115882,0.0001633313,0.00003556984,0.0002184723,0.0006108024,0.00001547751],"category_scores_gemma":[0.0001300777,0.0001758458,0.00004014201,0.00005681344,0.0003098791,0.00001439503,0.0003235074,0.0001264695,9.249868e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001654555,"about_ca_system_score_gemma":0.00003713268,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004994184,"about_ca_topic_score_gemma":0.00001214134,"domain_scores_codex":[0.9990054,0.00003824462,0.000265514,0.0003985184,0.00006964032,0.0002227249],"domain_scores_gemma":[0.9991558,0.00000494991,0.0002440977,0.0004619459,0.00006968992,0.00006353936],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001338973,0.00005074191,0.02838008,0.00007465493,0.00003894535,0.000004474588,0.00002576869,5.07712e-7,0.9646678,0.0002008554,0.000004672618,0.006417621],"study_design_scores_gemma":[0.0009986704,0.0001245276,0.1040744,0.00002199443,0.00003328727,0.00007009217,0.000007590604,0.00007341008,0.8935845,0.0002299911,0.000623318,0.0001582404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995804,0.000475797,0.002709186,0.0004985834,0.00009259491,0.0002669591,0.0000380465,0.00004378734,0.00007111009],"genre_scores_gemma":[0.9967646,0.0008092803,0.00185787,0.00003119297,0.00005172092,0.00002048861,0.0002621005,0.00003110193,0.0001716692],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07569428,"threshold_uncertainty_score":0.7170785,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007341417181338036,"score_gpt":0.2278594516050924,"score_spread":0.2205180344237543,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}